| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 403444 = | 64 (1.180) | 4 (0.080) | 3/254 | NT | 5.6% | coding (2613/2691 nt) | PP_0337 | sensory box protein |
| ? | NC_002947 | 403546 = | 72 (1.360) | coding (2511/2691 nt) | PP_0337 | sensory box protein | |||||
CGAAATCCCCGACAACCAGGACGACATGGAAATCACCTCGGCGGTGGTGGCCATGGCCCACAACCTGAAGCTGAAGGTGGTGGCCGAAGGGATCGAGACGCCGGAGCAGCTGGCGTTCCTGCGCCGTCACCGCTGCGACGTGGGCCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/403594‑403444‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCACCACCGCCGAGGTGATTTCCATGTCGTCCTGGTTGTCGGGGATTTCGTTGATGAAGCTGCGATCGATCTTGA > NC_002947/403546‑403619 CGAAATCCCCGACAACCAGGACGACATGGAAATCACCTCGGCGGTGGTGGCCATGGCCCACAACCTGAAGCTGAAGGTGGTGGCCGAAGGGATCGAGACGCCGGAGCAGCTGGCGTTCCTGCGCCGTCACCGCTGCGACGTGGGCCAGG < 1:303028/149‑1CGAAATCCCCGACAACCAGGACGACATGGAAATCACCTCGGCGGTGGTGGCCATGGCCCACAACCTGAAGCTGAAGGTGGTGGCCGAAGGGATCGAGACGCCGGAGCAGCTGGCGTTCCTGCGCCGTCACCGCTGCGACGTGGGCCAGG < 5:136661/149‑1 GAAATCCCCGACAACCAGGACGACATGGAAATCACCTCGGCGGTGGTGGCCATGGCCCACAACCTGAAGCTGAAGGTGGTGGCCGAAGGGATCGAGACGCCGGAGCAGCTGGCGTTCCTGCGCCGTCACCGCTGCGACGTGGGCCAGGG < 1:204728/149‑1 CATGGCCCACAACCTGAAGCTGAAGGTGGTGGCCGAAGGGATCGAGACGCCGGAGCAGCTGGCGTTCCTGCGCCGTCACCGCTGCGACGTGGGCCAGGGCCACCACCGCCGAGGTGATTTCCATGTCGTCCTGGTTGTCGGGGATTTCG > 2:329992/1‑149 CATGGCCCACAACCTGAAGCTGAAGGTGGTGGCCGAAGGGATCGAGACGCCGGAGCAGCTGGCGTTCCTGCGCCGTCACCGCTGCGACGTGGGCCAGGGCCACCACCGCCGAGGTGATTTCCATGTCGTCCTGGTTGTCGGGGATTTCG > 7:141466/1‑149 GCCCACAACCTGAAGCTGAAGGTGGTGGCCGAAGGGATCGAGACGCCGGAGCAGCTGGCGTTCCTGCGCCGTCACCGCTGCGACGTGGGCCAGGGCCACCACCGCCGAGGTGATTTCCATGTCGTCCTGGTTGTCGGGGATTTCGTTG < 8:141466/148‑1 GTGGTGGCCGAAGGGATCGAGACGCCGGAGCAGCTGGCGTTCCTGCGCCGTCACCGCTGCGACGTGGGCCAGGGCCACCACCGCCGAGGTGATTTCCATGTCGTCCTGGTTGTCGGGGATTTCGTTGATGAAGCTGCGATCGATCTTGA < 1:329992/149‑1 CGAAATCCCCGACAACCAGGACGACATGGAAATCACCTCGGCGGTGGTGGCCATGGCCCACAACCTGAAGCTGAAGGTGGTGGCCGAAGGGATCGAGACGCCGGAGCAGCTGGCGTTCCTGCGCCGTCACCGCTGCGACGTGGGCCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/403594‑403444‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCACCACCGCCGAGGTGATTTCCATGTCGTCCTGGTTGTCGGGGATTTCGTTGATGAAGCTGCGATCGATCTTGA > NC_002947/403546‑403619 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |