| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 434552 = | 84 (1.550) | 5 (0.100) | 5/246 | NT | 6.4% | coding (648/2178 nt) | glcB | malate synthase G |
| ? | NC_002947 | 434621 = | 66 (1.290) | coding (579/2178 nt) | glcB | malate synthase G | |||||
AAGGTCATCGCCTTCGCCCGTGCCTTCCTCGACGAAGCCGCGCCACTGGCCGCCGGCTCGCACGTTGACTCCACGGGCTACCGCATCGAAGGCGGCAAGCTGGTTGTTGCCCTGAAAGGCGGCAGCAACACTGGCCTGCGCGACGATGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/434701‑434552‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatgcgGTAGCCCGTGGAGTCAACGTGCGAGCCGGCGGCCAGTGGCGCGGCTTCGTCGAGGAAGGCACGGGCGAAGGCGATGACCTTGTCGCCGCGCACCTTGTTGTAACCCTGGCCTTTTTCGGCGCCGCCTTCATCGCTGATGG > NC_002947/434621‑434760 AAGGTCATCGCCTTCGCCCGTGCCTTCCTCGACGAAGCCGCGCCACTGGCCGCCGGCTCGCACGTTGACTCCACGGGCTACCGCATCGAAGGCGGCAAGCTGGTTGTTGCCCTGAAAGGCGGCAGCAACACTGGCCTGCGCGACGATGC > 2:269742/1‑149AAGGTCATCGCCTTCGCCCGTGCCTTCCTCGACGAAGCCGCGCCACTGGCCGCCGGCTCGCACGTTGACTCCACGGGCTACCGCATCGAAGGCGGCAAGCTGGTTGTTGCCCTGAAAGGCGGCAGCAACACTGGCCTGCGCGACGATGC > 4:291173/1‑149 TCGCACGTTGACTCCACGGGCTACCGCATCGAAGGCGGCAAGCTGGTTGTTGCCCTGAAAGGCGGCAGCAACACTGGCCTGCGCGACGATGC > 2:242100/1‑92 TCGCACGTTGACTCCACGGGCTACCGCATCGAAGGCGGCAAGCTGGATGTTGCCCTGAAAGGCGGCAGCAACACTGGCCTGCGCGACGATGC < 1:242100/92‑1 CTACCGCATCGAAGGCGGCAAGCTGGTTGTTGCCCTGAAAGGCGGCAGCAACACTGGCCTGCGCGACGATGCGGTAGCCCGTGGAGTCAACGTGCGAGCCGGCGGCCAGTGGCGCGGCTTCGTC < 1:167211/124‑1 CTACCGCATCGAAGGCGGCAAGCTGGTTGTTGCCCTGAAAGGCGGCAGCAACACTGGCCTGCGCGACGATGCGGTAGCCCGTGGAGTCAACGTGCGAGCCGGCGGCCAGTGGCGCGGCTTCGTC > 2:167211/1‑124 ACCGCATCGAAGGCGGCAAGCTGGTTGTTGCCCTGAAAGGCGGCAGCAACACTGGCCTGCGCGACGATGCGGTAGCCCGTGGAGTCAACGTGCGAGCCGGCGGCCAGTGGCGCGGCTTCGTCGAGGAAGGCACGGGCGAAGGCGATGAC > 1:150561/1‑149 GCATCGAAGGCGGCAAGCTGGTTGTTGCCCTGAAAGGCGGCAGCAACACTGGCCTGCGCGACGATGCGGTAGCCCGTGGAGTCAACGTGCGAGCCGGCGGCCAGTGGCGCGGCTTCGTCGAGGAAGGCACGGGCGAAGGCGATGACCTT > 7:147785/1‑149 AAGGCGGCAGCAACACTGGCCTGCGCGACGATGCGGTAGCCCGTGGAGTCAACGTGCGAGCCGGCGGCCAGTGGCGCGGCTTCGTCGAGGAAGGCACGGGCGAAGGCGATGACCTTGTCGCCGCGCACCTTGTTGTAACCCTGGCCTTT < 2:150561/149‑1 CGATGCGGTAGCCCGTGGAGTCAACGTGCGAGCCGGCGGCCAGTGGCGCGGCTTCGTCGAGGAAGGCACGGGCGAAGGCGATGACCTTGTCGCCGCGCACCTTGTTGTAACCCTGGCCTTTTTCGGCGCCGCCTTCATCGCTGATGG < 6:205731/147‑1 AAGGTCATCGCCTTCGCCCGTGCCTTCCTCGACGAAGCCGCGCCACTGGCCGCCGGCTCGCACGTTGACTCCACGGGCTACCGCATCGAAGGCGGCAAGCTGGTTGTTGCCCTGAAAGGCGGCAGCAACACTGGCCTGCGCGACGATGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/434701‑434552‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatgcgGTAGCCCGTGGAGTCAACGTGCGAGCCGGCGGCCAGTGGCGCGGCTTCGTCGAGGAAGGCACGGGCGAAGGCGATGACCTTGTCGCCGCGCACCTTGTTGTAACCCTGGCCTTTTTCGGCGCCGCCTTCATCGCTGATGG > NC_002947/434621‑434760 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |