New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 449090 = | 74 (1.370) | 4 (0.080) | 4/246 | NT | 5.1% | coding (261/1779 nt) | PP_0370 | acyl‑CoA dehydrogenase family protein |
? | NC_002947 | 449137 = | 80 (1.560) | coding (308/1779 nt) | PP_0370 | acyl‑CoA dehydrogenase family protein |
AGGCAGGCGCCGGCCGTCAGCATCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/449239‑449090 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcggcgGTATGGGTATGCCCAAGGCCATCTCGGCCCAGGTCGAGGAAATGGTCAACGCGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATAC > NC_002947/449137‑449282 AGGCAGGCGCCGGACGTCATCATCGGGTACAGGCCGAAGGCCAGGCTTGACGCGTTGACCATTTCCTCGACCTCGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGC < 4:5125/149‑1 GCAGGCGCCGGCCGTCAGCATCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCG > 8:12056/1‑148 CATCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCG < 7:88358/127‑1 CATCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCG > 8:88358/1‑127 ATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCGGTATGGGTATGCCCAAGGCCATCTCGGCCCAGGTCGAGGAAATGGTCAACGCGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCC > 1:171590/1‑149 CGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCGGTATGGGTATGCCCAAGGCCATCTCGGCCCAGGTCGAGGAAATGGTCAACGCGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCCTGCC > 6:68107/1‑149 AACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCGGTATGGGTATGCCCAAGGCCATCTCGGCCCAGGTCGAGGAAATGGTCAACGCGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCCTGCCTGTCG < 2:171590/149‑1 CCGCCCACGCCCACCCAGCCGCCTTCGGCGGTATGGGTATGCCCAAGGCCATCTCGGCCCAGGTCGAGGAAATGGTCAACGCGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCAC < 5:68107/149‑1 GCGGTATGGGTATGCCCAAGGCCATCTCGGCCCAGGTCGAGGAAATGGTCAACGCGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATAC < 5:245974/149‑1 AGGCAGGCGCCGGCCGTCAGCATCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/449239‑449090 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcggcgGTATGGGTATGCCCAAGGCCATCTCGGCCCAGGTCGAGGAAATGGTCAACGCGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATAC > NC_002947/449137‑449282 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |