| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 505818 = | 66 (1.220) | 6 (0.120) | 6/248 | NT | 8.3% | coding (312/1482 nt) | trpE | anthranilate synthase component 1 |
| ? | NC_002947 | 505877 = | 69 (1.340) | coding (371/1482 nt) | trpE | anthranilate synthase component 1 | |||||
GACACCATCAGCAGGATATCCGGTACGCCCAGCGGGTCTGGGTTGGGGCTGGCCCCCAGGCGCTTTTCTACATAGCGCACGCAGTCGTAGCCAAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/505967‑505818‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actttgGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTCCGACGCGGTGGTGGTGTTCGACAACCTGGCGGGCAAGATGCACGCCATCGTGT > NC_002947/505877‑506020 GACACCATCAGCAGGATATCCGGTAAGCCCAGCGGGTCTGGGTTGGGGCTGGCCCCCAGGCGCTTTTCTACATAGCGCACGCAGTCGTAGCCAAAGTAGCCGACCAGGCCGCCATTGCAACGCGGCAGGCCTGGGATATCGGCAACTTT > 3:269904/1‑149 AGCAGGATATCCGGTACGCCCAGCGGGTCTGGGTTGGGGCTGGCCCCCAGGCGCTTTTCTACATAGCGCACGCAGTCGTAGCCAAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTT < 3:12938/140‑1 AGCAGGATATCCGGTACGCCCAGCGGGTCTGGGTTGGGGCTGGCCCCCAGGCGCTTTTCTACATAGCGCACGCAGTCGTAGCCAAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTT > 4:12938/1‑140 AAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTC > 3:114670/1‑149 AGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGGGTACCGGATATCCTGCTGA < 4:328672/137‑1 AGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGA > 3:328672/1‑137 CGACCAGGCCGCCATTGAAACGCGGCAGGCCTGG‑‑‑‑TCGGCTACTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTCCGACGCGGTGGT > 7:280612/1‑149 GACCAGGCCGCCATTGAAACGCGGCAGGCCTGG‑‑‑‑TCGGCTACTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCC > 7:270946/1‑123 GACCAGGCCGCCATTGAAACGCGGCAGGCCTGG‑‑‑‑TCGGCTACTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCC < 8:270946/123‑1 CTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTCCGACGCGGTGGTGGTGTTCGACAACCTGGCGGGCAAGATGCACGCCATCGTGT > 4:39256/1‑149 GACACCATCAGCAGGATATCCGGTACGCCCAGCGGGTCTGGGTTGGGGCTGGCCCCCAGGCGCTTTTCTACATAGCGCACGCAGTCGTAGCCAAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/505967‑505818‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actttgGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTCCGACGCGGTGGTGGTGTTCGACAACCTGGCGGGCAAGATGCACGCCATCGTGT > NC_002947/505877‑506020 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |