| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 637399 = | 71 (1.310) | 4 (0.080) | 3/248 | NT | 6.1% | coding (277/630 nt) | PP_0548 | phenylacrylic acid decarboxylase PadA |
| ? | NC_002947 | 637468 = | 55 (1.070) | coding (346/630 nt) | PP_0548 | phenylacrylic acid decarboxylase PadA | |||||
TGGCGCTTCGCGTGGCACCAGGATCAGCTGGCGACGCTCCTTGAGGGTAACGTCGGCAGCACGCTCGATCAGGTTGTTGCAGGCGCCAGTGGCAATGGCCGACAAGGTGCCAGTGGAACAGGGGACCACCACCATTGCCGCCGGGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/637548‑637399‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccTGCAACAACCTGATCGAGCGTGC‑TGCCGACGTTACCCTCAAGGAGCGTCGCCAGCTGATCCTGGTGCCACGCGAAGCGCCATTCTCCACCATCCACCTGGAAAACATGCTCAAGCTGTCGCAAATGGGCGCGGTGATCCTGCCGGCGG > NC_002947/637468‑637615 TGGCGCTTCGCGTGGCACCAGGATCAGCTGGCGACGCTCCTTGAGGGTAACGTCGGCAGCACGCTCGATCAGGTTGTTGCAGGCGCCAGTGGCAATGGCCGACAAGGTGCCAGTGGAACAGGGGACCACCACCATTGCCGCCGGGGCGC > 2:554/1‑149TGGCGCTTCGCGTGGCACCAGGATCAGCTGGCGACGCTCCTTGAGGGTAACGTCGGCAGCACGCTCGATCAGGTTGTTGCAGGCGCCAGTGGCAATGGCCGACAAGGTGCCAGTGGAACAGGGGACCACCACCATTGCCGCCGGGGCGC < 5:45615/149‑1 TGCAGGCGCCAGTGGCAATGGCCGACAAGGTGCCAGTGGAACAGGGGACCACCACCATTGCCGCCGGGGCGCCTGCAACAACCTGCTCGAGCGTGC‑TGCCGACGTTACCCTCAAGGAGCGTCGCCAGCTGATCCTGGTGCCACGCGAAG > 7:5162/1‑149 CAGGCGCCAGTGGCAATGGCCGACAAGGTGCCAGTGGAACAGGGGACCACCACCATTGCCGCCGGGGCGCCTGCAACAACCTGATCGAGCGTGC‑TGCCGACGTTACCCTCAAGGAGCGTCGCCAGCTGATCCTGGTGCCACGCGAAGCG > 2:279076/1‑149 CAGGCGCCAGTGGCAATGGCCGACAAGGTGCCAGTGGAACAGGGGACCACCACCATTGCCGCCGGGGCGCCTGCAACAACCTGATCGAGCGTGC‑TGCCGACGTTACCCTCAAGGAGCGTCGCCAGCTGATCCTGGTGCCACGCGAAGCG > 2:283013/1‑149 GTGCCAGTGGAACAGGGGACCACCACCATTGCCGCCGGGGCGCCTGCAACAACCTGATCGAGCGTGC‑TGCCGACGTTACCCTCAAGGAGCGTCGCCAGCTGATCCTGGTGCCACGCGAAGCGCCATTCTCCACCATCCCCCTGGAAAAC < 8:5162/149‑1 CGGGGCGCCTGCAACAACCTGATCGAGCGTGC‑TGCCGACGTTACCCTCAAGGAGCGTCGCCAGCTGATCCTGGTGCCACGCGAAGCGCCATTCTCCACCATCCACCTGGAAAACATGCTCAAGCTGTCGCAAATGGGCGCGGTGATCCT < 1:279076/149‑1 CGGGGCGCCTGCAACAACCTGATCGAGCGTGC‑TGCCGACGTTACCCTCAAGGAGCGTCGCCAGCTGATCCTGGTGCCACGCGAAGCGCCATTCTCCACCATCCACCTGGAAAACATGCTCAAGCTGTCGCAAATGGGCGCGGTGATCCT < 1:283013/149‑1 GCGCCTGCAACAACCTGATCGAGCGTGCGTGCCGACGTTACCCTCAAGGAGCGTCGCCAGCTGATCATGGTGCCACGCGAAGCGCCATTCTCCACCATCCACCTGGAAAACATGATCAAGATGTCGCAAATGGGCGCGGTCATCCTCCC > 1:21066/1‑149 GCGCCTGCAACAACCTGATCGAGCGTGC‑TGCCGACGTTACCCTCAAGGAGCGTCGCCAGCTGATCCTGGTGCCACGCGAAGCGCCATTCTCCACCATCCACCTGGAAAACATGCTCAAGCTGTCGCAAATGGGCGCG > 5:87764/1‑137 GCGCCTGCAACAACCTGATCGAGCGTGC‑TGCCGACGTTACCCTCAAGGAGCGTCGCCAGCTGATCCTGGTGCCACGCGAAGCGCCATTCTCCACCATCCACCTGGAAAACATGCTCAAGCTGTCGCAAATGGGCGCG < 6:87764/137‑1 GCCTGCAACAACCTGATCGAGCGTGC‑TGCCGACGTTACCCTCAAGGAGCGTCGCCAGCTGATCCTGGTGCCACGCGAAGCGCCATTCTCCACCATCCACCTGGAAAACATGCTCAAGCTGTCGCAAATGGGCGCGGTGATCCTGCCGGC > 2:127483/1‑149 CTGCAACAACCTGATCGAGCGTGC‑TGCCGACGTTACCCTCAAGGAGCGTCGCCAGCTGATCCTGGTGCCACGCGAAGCGCCATTCTCCACCATCCACCTGGAAAACATGCTCAAGCTGTCGCAAATGGGCGCGGTGATCCTGCCGGCGG > 3:235386/1‑149 CTGCAACAACCTGATCGAGCGTGC‑TGCCGACGTTACCCTCAAGGAGCGTCGCCAGCTGATCCTGGTGCCACGCGAAGCGCCATTCTCCACCATCCACCTGGAAAACATGCTCAAGCTGTCGCAAATGGGCGCGGTGATCCTGCCGGCGG > 4:277361/1‑149 CTGCAACAACCTGATCGAGCGTGC‑TGCCGACGTTACCCTCAAGGAGCGTCGCCAGCTGATCCTGGTGCCACGCGAAGCGCCATTCTCCACCATCCACCTGGAAAACATGCTCAAGCTGTCGCAAATGGGCGCGGTGATCCTGCCGGCGG > 7:216797/1‑149 TGGCGCTTCGCGTGGCACCAGGATCAGCTGGCGACGCTCCTTGAGGGTAACGTCGGCAGCACGCTCGATCAGGTTGTTGCAGGCGCCAGTGGCAATGGCCGACAAGGTGCCAGTGGAACAGGGGACCACCACCATTGCCGCCGGGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/637548‑637399‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccTGCAACAACCTGATCGAGCGTGC‑TGCCGACGTTACCCTCAAGGAGCGTCGCCAGCTGATCCTGGTGCCACGCGAAGCGCCATTCTCCACCATCCACCTGGAAAACATGCTCAAGCTGTCGCAAATGGGCGCGGTGATCCTGCCGGCGG > NC_002947/637468‑637615 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |