New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 719051	51 (0.940)	3 (0.060)	3/248	NT	5.7%	coding (866/1410 nt)	PP_0613	amidase family protein
	?	NC_002947	= 719074	50 (0.970)					coding (843/1410 nt)	PP_0613	amidase family protein

AGCGCAGCCCCGGGTCAAGCAACGCTTTCTGCTCATCGCTCAAGGCACTGGCCAACCGCGCCGCGCCGGCAAACCACAGGGTGTTGAAGGTTTCCAGCGGGTCGCTGAAGCCCGGGTCCACTTCCTCTACCTGCGCACCCAGCCGCGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/718899‑719051 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggcACTGGTGGCGCAAGCGGTGCAGCGCCTGGCGCGGCTGGGTGCGCAGGTAGAGGAAGTGGACCCGGGCTTCAGCGACCCGCTGGAAACCTTCAACACCCTGTGGTTTGCCGGCGCGGCGCGGTTGGCCAGTGCCTTGAGCGATGAG  <  NC_002947/719074‑718930                                                                                                                                                                                                                                                                                                            AGCGCAGCCCCGGGTCAAGCAACGCTTTCTGCTCATCGCTCAAGGCACTGGCCAACCGCGCCGCGCCGGCAAACCACAGGGTGTTGAAGGTTTCCAGCGGGTCGCTGAAGCCCGGGTCCACTTCCTCTACCTGCGCACCCAGCCGCGCC                                                                                                                                                       >  6:169572/1‑149  GCGCAGCCCCGGGTCAAGCAACGCTTTCTGCTCATCGCTCAAGGCACTGGCCAACCGCGCCGCGCCGGCAAACCACAGGGTGTTGAAGGTTTCCAGCGGGTCGCTGAAGCCCGGGTCCACTTCCTCTACCTGCGCACCCAGCCGCGC                                                                                                                                                        >  7:209950/1‑147       GCCCCGGGTCAAGCAACGCTTTCTGCTCATCGCTCAAGGCACTGGCCAACCGCGCCGCGCCGGCAAACCACAGGGTGTTGAAGGTTTCCAGCGGGTCGCTGAAGCCCGGGTCCACTTCCTCTACCTGCGCACCCAGCCGCGCCAGGCA                                                                                                                                                  >  2:308065/1‑148                                           AGGCACTGGCCAACCGCGCCGCGCCGGCAAACCACAGGGTGTTGAAGGTTTCCAGCGGGTCGCTGAAGCCCGGGTCCACTTCCTCTACCTGCGCACCCAGCCGCGCCAGGCACTGGTGGCGCAAGCGGTGCAGCGCCTGGCGCGGCTGG                                                                                                             <  5:329514/149‑1                                                   GCCAACCGCGCCGCGCCGGCAAACCACAGGGTGTTGAAGGTTTCCAGCGGGTCGCTGAAGCCCGGGTCCACTTCCTCTACCTGCGCACCCAGCCGCGCCAGGCACTGGTGGCGCAAGCGGTGCAGCGCCTGGCGC                                                                                                                   >  7:168403/1‑135                                                   GCCAACCGCGCCGCGCCGGCAAACCACAGGGTGTTGAAGGTTTCCAGCGGGTCGCTGAAGCCCGGGTCCACTTCCTCTACCTGCGCACCCAGCCGCGCCAGGCACTGGTGGCGCAAGCGGTGCAGCGCCTGGCGC                                                                                                                   <  8:168403/135‑1                                                                                                                                                    CCAGGCACTGGTGGCGCAAGCGGTGCAGCGCCTGGCGCGGCTGGGTGCGCAGGTAGAGGAAGTGGACCCGGGCTTCAGCGACCCGCTGGAAACCTTCAACACCCTGTGGTTTGCCGGCGCGGCGCGGTTGGCCAGTGCCTTGAGCGAT     >  3:135720/1‑148                                                                                                                                                    CCAGGCACTGGTGGCGCAAGCGGTGCAGCGCCTGGCGCGGCTGGGTGCGCAGGTAGAGGAAGTGGACCCGGGCTTCAGCGACCCGCTGGAAACCTTCAACACCCTGTGGTTTGCCGGCGCGGCGCGGTTGGCCAGTGCCTTGAGCGAT     <  4:135720/148‑1                                                                                                                                                     CAGGCACTGGTGGCGCAAGCGGTGCAGCGCCTGGCGCGGCTGGGTGCGCAGGTAGAGGAAGTGGACCCGGGCTTCAGCGACCCGCTGGAAACCTTCAACACCCTGTGGTTTGCCGGCGCGGCGCGGTTGGCCAGTGCCTTGAGCGATGA   <  1:43991/149‑1                                                                                                                                                     CAGGCACTGGTGGCGCAAGCGGTGCAGCGCCGGGCGCGGCTGGGTGCGCAGGTAGAGGAAGTGGACCCGGGCTTCAGCGACCCGCTGGAAACCTTCAACACCCTGTGGTTTGCCGGCGCGGCGCGGTTGGCCAGTGCCTTGAGCGATG    <  4:106345/148‑1                                                                                                                                                      AGGCACTGGTGGCGCAAGCGGTGCAGCGCCTGGCGCGGCTGGGTGCGCAGGTAGAGGAAGTGGACCCGGGCTTCAGCGACCCGCTGGAAACCTTCAACACCCTGTGGTTTGCCGGCGCGGCGCGGTTGGCCAGTGCCTTGAGCGATGAG  <  6:236456/149‑1                                                                                                                                                        GCACTGGTGGCGCAAGCGGTGCAGCGCCTGGCGCGGCTGGGTGCGCAGGTAGAGGAAGTGGACCCGGGCTTCAGCGACCCGCTGGAAACCTTCAACACCCTGTGGTTTGCCGGCGCGGCGCGGTTGGCCAGTGCCTTGAGC        >  1:252048/1‑141                                                                                                                                                        GCACTGGTGGCGCAAGCGGTGCAGCGCCTGGCGCGGCTGGGTGCGCAGGTAGAGGAAGTGGACCCGGGCTTCAGCGACCCGCTGGAAACCTTCAACACCCTGTGGTTTGCCGGCGCGGCGCGGTTGGCCAGTGCCTTGAGC        <  2:252048/141‑1                                                                                                                                                                                                                                                                                                            AGCGCAGCCCCGGGTCAAGCAACGCTTTCTGCTCATCGCTCAAGGCACTGGCCAACCGCGCCGCGCCGGCAAACCACAGGGTGTTGAAGGTTTCCAGCGGGTCGCTGAAGCCCGGGTCCACTTCCTCTACCTGCGCACCCAGCCGCGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/718899‑719051 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggcACTGGTGGCGCAAGCGGTGCAGCGCCTGGCGCGGCTGGGTGCGCAGGTAGAGGAAGTGGACCCGGGCTTCAGCGACCCGCTGGAAACCTTCAACACCCTGTGGTTTGCCGGCGCGGCGCGGTTGGCCAGTGCCTTGAGCGATGAG  <  NC_002947/719074‑718930

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.