New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 746753 = | NA (NA) | 7 (0.140) | 7/244 | NT | NA | coding (121/357 nt) | PP_0638 | transposase |
? | NC_002947 | 746788 = | NA (NA) | coding (86/357 nt) | PP_0638 | transposase |
TGCTCCCGATTTCTTTCTGGAGCCAGCCCGCCATGATGCGCCCCGACAGCAAAGTCGAAAAAGTCTACCTCTACCCCAAGCCCGTGGACTTTCGAAAGTCCATCGACGGCCTCACTGCCCTGGTCGAACTGGACATCAAGGTCGCCGTGTTCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/746908‑746753 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcgaccAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTG > NC_002947/746788‑746935 TGCTCCCGATTTCTTTCTGGAGCCAGCCCGCCATGATGCGCCCCGACAGCAAAGTCGAAAAAGTCTACCTCTACCCCAAGCCCGTGGACTTTCGAAAGTCCATCGACGGCCTCACTGCCCTGGTCGAACTGGACATCAAGGTCGCCGTG > 4:159304/1‑149 CTCCCGATTTCTTTCTGGAGCCAGCCCGCCATGATGCGCCCCGACAGCAAAGTCGAAAAAGTCTACCTCTACCCCAAGCCCGTGGACTTTCGAAAGTCCATCGACGGCCTCACTGCCCTGGTCGAACTGGACATCAAGGTCGCCGTGTT > 7:3968/1‑149 CTCCCGATTTCTTTCTGGAGCCAGCCCGCCATGATGCGCCCCGACAGCAAAGTCGAAAAAGTCTACCTCTACCCCAAGCCCGTGGACTTTCGAAAGTCCATCGACGGCCTCACTGCCCTGGTCGAACTGGACATCAAGGTCGCCGTGTT < 6:176791/149‑1 TCCCGATTTCTTTCTGGAGCCAGCCCGCCATGATGCGCCCCGACAGCAAAGTCGAAAAAGTCTACCTCTACCCCAAGCCCGTGGACTTTCGAAAGTCCATCGACGGCCTCACTGCCCTGGTCGAACTGGACATCAAGGTCGCCGTGTTC > 5:45238/1‑149 CCCGATTTCTTTCTGGAGCCAGCCCGCCATGATGCGCCCCGACAGCAAAGTCGAAAAAGTC‑ACCTCTACCCCAAGCCCGTGGACTTTCGAAAGTCCATCGACGGCCTCACTGCCCTGGTCGAACTGGACATCAAGGTCGCCGTGTTCGA < 3:102765/149‑1 CCGATTTCTTTCTGGAGCCAGCCCGCCATGATGCGCCCCGACAGCAAAGTCGAAAAAGTCTACCTCTACCCCAAGCCCGTGGACTTTCGAAAGTCCATCGACGGCCTCACTGCCCTGGTCGCACTGGACATCAAGGTCGCCGTGTTCGc > 4:321771/1‑148 CCGATTTCTTTCTGGAGCCAGCCCGCCATGATGCGCCCCGACAGCAAAGTCGAAAAAGTCTACCTCTACCCCAAGCCCGTGGACTTTCGAAAGTCCATCGACGGCCTCACTGCCCTGGTCGAACTGGACATCAAGGTCGCCGTGTTCGA > 4:30158/1‑149 CCGATTTCTTTCTGGAGCCAGCCCGCCATGATGCGCCCCGACAGCAAAGTCGAAAAAGTCTACCTCTACCCCAAGCCCGTGGACTTTCGAAAGTCCATCGACGGCCTCACTGCCCTGGTCGAACTGGACATCAAGGTCGCCGTGTTCGA > 3:75847/1‑149 CGATTTCTTTCTGGAGCCAGCCCGCCATGATGCGCCCCGACAGCAAAGTCGAAAAAGTCTACCTCTACCCCAAGCCCGTGGACTTTCGAAAGTCCATCGACGGCCTCACTGCCCTGGTCGAACTGGACATCAAGGTCGCCGTGTTCGAC > 2:1398/1‑149 CCATGATGCGCCCCGACAGCAAAGTCGAAAAAGTCTACCTCTACCCCAAGCCCGTGGACTTTCGAAAGTCCATCGACGGCCTCACTGCCCTGGTCGAACTGGACATCAAGGTCGCCGTGTTCG > 8:744/1‑123 CCATGATGCGCCCCGACAGCAAAGTCGAAAAAGTCTACCTCTACCCCAAGCCCGTGGACTTTCGAAAGTCCATCGACGGCCTCACTGCCCTGGTCGAACTGGACATCAAGGTCGCCGTGTTCG < 7:744/123‑1 GCGCCCCGACAGCAAAGTCGAAAAAGTCTACCTCTACCCCAAGCCCGTGGACTTTCGAAAGTCCATCGACGGCCTCACTGCCCTGGTCGAACTGGACATCAAGGTCGCCGTGT > 2:193293/1‑113 GCGCCCCGACAGCAAAGTCGAAAAAGTCTACCTCTACCCCAAGCCCGTGGACTTTCGAAAGTCCATCGACGGCCTCACTGCCCTCGTCGAACTGGACATCAAGGTCGCCGTGT < 1:193293/113‑1 GCCCTGGTCGAACTGGACATCAAGGTCGCCGTGTTCGACCAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGG > 3:97236/1‑139 GCCCTGGTCGAACTGGACATCAAGGTCGCCGTGTTCGACCAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGG < 4:97236/139‑1 CCTGGTCGAACTGGACATCAAGGTCGCCGTGTTCGACCAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGA > 2:123188/1‑148 TGGTCGAACTGGACATCAAGGTCGCCGTGTTCGACCAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAA < 2:285667/144‑1 TGGTCGAACTGGACATCAAGGTCGCCGTGTTCGACCAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAA > 1:285667/1‑144 GGTCGAACTGGACATCAAGGTCGCCGTGTTCGACCAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATC > 8:314793/1‑149 cGACATCAAGGTCGCCGTGTTCGACCAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACA < 1:123188/148‑1 GTTCGACCAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTG > 4:62501/1‑148 GACCAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTTTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCTCAGCATCGGGAATCAGGTGGACGG < 6:276971/149‑1 ACCAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGT < 2:132710/149‑1 ACCAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGT < 2:64622/149‑1 ACCAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGG < 6:170867/133‑1 ACCAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGG > 5:170867/1‑133 CCAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAG < 3:112018/111‑1 CCAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAG > 4:112018/1‑111 CAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTG < 5:49325/149‑1 CAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTG > 2:285264/1‑149 CAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGG > 7:267632/1‑131 CAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGG < 8:267632/131‑1 TGCTCCCGATTTCTTTCTGGAGCCAGCCCGCCATGATGCGCCCCGACAGCAAAGTCGAAAAAGTCTACCTCTACCCCAAGCCCGTGGACTTTCGAAAGTCCATCGACGGCCTCACTGCCCTGGTCGAACTGGACATCAAGGTCGCCGTGTTCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/746908‑746753 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcgaccAGGGCAGTGAGGCCGTCGATGGACTTTCGAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTG > NC_002947/746788‑746935 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |