New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	823702 =	60 (1.110)	4 (0.080)	4/248	NT	6.7%	coding (902/1431 nt)	PP_0708	betaine‑aldehyde dehydrogenase
	?	NC_002947	823748 =	55 (1.070)					coding (856/1431 nt)	PP_0708	betaine‑aldehyde dehydrogenase

GCAAGTCGGCCATCGTGGTGTTCGATGATTGCGATGTCGACCAGGCAGTGGAATGGATTGTTGCCGGCATCAGCTGGAATGCCGGCCAGATGTGTTCGGCCACATCGCGGCTGCTGGTGCAGGACGGCATTGCCGATGCACTGCTGCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/823852‑823702 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcgATGTGGCCGAACACATCTGGCCGGCATTCCAGCTGATGCCGGCAACAATCCATTCCACTGCCTGGTCGACATCGCAATCATCGAACACCACGATGGCCGACTTGCCACCCAGTTCCAGCGTCACCGGCCGGCACTGCGCCGAAG  >  NC_002947/823748‑823891                                                                                                                                                                                                                                                                                                         GCAAGTCGGCCATCGTGGTGTTCGATGATTGCGATGTCGACCAGGCAGTGGAATGGATTGTTGCCGGCATCAGCTGGAATGCCGGCCAGATGTGTTCGGCCACATCGCGGCTGCTGGTGCAGGACGGCATTGCCGATGCACTGCTGCC                                                                                                                                                     <  8:309040/148‑1  CAAGTCGGCCATCGTGGTGTTCGATGATTGCGATGTCGACCAGGCAGTGGAATGGATTGTTGCCGGCATCAGCTGGAATGCCGGCCAGATGTGTTCGGCCACATCGCGGCTGCTGGTGCAGGACGGCATTGCCGATGCACTGCTGCCGC                                                                                                                                                   >  4:173993/1‑149                                                                                                       CATCGCGGCTGCTGGTGCAGGACGGCATTGCCGATGCACTGCTGCCGCGATGTGGCCGAACACATCTGGCCGGCATTCCAGCTGATGCCGGCAACAATCCATTCCACTGCCTGGTCGACATCGCAATCATCGAACACCACGATGGCCGA                                              >  2:168446/1‑149                                                                                                            CGGCTGCTGGTGCAGGACGGCATTGCCGATGCACTGCTGCCGCGATGTGGCCGAACACATCTGGCCGGCATTCCAGCTGATGCCGGCAACAATCCATTCCACTGCCTGGTCGACATCGCAATCATCGAACACCACGATGGCCGACTTGC                                         >  7:184027/1‑149                                                                                                             GGCTGCTGGTGCAGGACGGCATTGCCGATGCACTGCTGCCGCGATGTGGCCGAACACATCTGGCCGGCATTCCAGCTGATGCCGGCAACAATCCATTCCACTGCCTGGTCGACATCGCAATCATCG                                                               <  1:292095/126‑1                                                                                                             GGCTGCTGGTGCAGGACGGCATTGCCGATGCACTGCTGCCGCGATGTGGCCGAACACATCTGGCCGGCATTCCAGCTGATGCCGGCAACAATCCATTCCACTGCCTGGTCGACATCGCAATCATCG                                                               >  2:292095/1‑126                                                                                                                                                   CCGCGATGTGGCCGAACACATCTGGCCGGCATTCCAGCTGATGCCGGCAACAATCCATTCCACTGCCTGGTCGACATCGCAATCATCGAACACCACGATGGCCGACTTGCCACCCAGTTCCAGCGTCACCGGCCGGCACTGCGCCGAAG  >  2:90842/1‑149                                                                                                                                                     GCGATGTGGCCGAACACATCTGGCCGGCATTCCAGCTGATGCCGGCAACAATCCATTCCACTGCCTGGTCGACATCGCAATCATCGAACACCACGATGGCCGACTTGCCACCCAGTTCCAGCGTCACCGGCCGGCACTGC         >  1:209724/1‑140                                                                                                                                                     GCGATGTGGCCGAACACATCTGGCCGGCATTCCAGCTGATGCCGGCAACAATCCATTCCACTGCCTGGTCGACATCGCAATCATCGAACACCACGATGGCCGACTTGCCACCCAGTTCCAGCGTCACCGGCCGGCACTGC         <  2:209724/140‑1                                                                                                                                                                                                                                                                                                         GCAAGTCGGCCATCGTGGTGTTCGATGATTGCGATGTCGACCAGGCAGTGGAATGGATTGTTGCCGGCATCAGCTGGAATGCCGGCCAGATGTGTTCGGCCACATCGCGGCTGCTGGTGCAGGACGGCATTGCCGATGCACTGCTGCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/823852‑823702 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcgATGTGGCCGAACACATCTGGCCGGCATTCCAGCTGATGCCGGCAACAATCCATTCCACTGCCTGGTCGACATCGCAATCATCGAACACCACGATGGCCGACTTGCCACCCAGTTCCAGCGTCACCGGCCGGCACTGCGCCGAAG  >  NC_002947/823748‑823891

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.