New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 87411563 (1.160)6 (0.120) 4/246 NT 9.4% coding (473/621 nt) PP_0758 hypothetical protein
?NC_002947 = 874150 56 (1.090)coding (508/621 nt) PP_0758 hypothetical protein

TTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/873967‑874115
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcgggTAATCGGCGTGTCCGGGTCAAGCCAGGCCGCCTGCCCCGCTTCGTCGAGGATGAGCGGCCGACGCTGATTCATGGCCGCCTGGGTCACCACCGCGCAACTCAGCCATACCTGGTCCTGCACCGGATAGGCCTCCCACACCGCCGCA  <  NC_002947/874150‑874005
                                                                                                                                                                                                                                                                                                       
TTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCAGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGG                                                                                                                                                    >  5:168197/1‑149
                          GTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGGTAATCGGCGTGTCCGGGTCAAGCCAG                                                                                                                          >  6:172620/1‑149
                              CTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGGTAATCGGCGTGTCCGGGTCAAGCCAGGCCG                                                                                                                      >  2:235091/1‑149
                              CTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGGTAATCGGCGTGTCCGGGTCAAGCCAGGCCG                                                                                                                      >  4:86902/1‑149
                                            GGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGGTAATCGGCGTGTCCGGGTCAAGCCAGGCCGCCTGCCCCGCTTCG                                                                                                        <  1:235091/149‑1
                                            GGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGGTAATCGGCGTGTCCGGGTCAAGCCAGGCCGCCTGCCCCGCTTCG                                                                                                        <  3:86902/149‑1
                                                TGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGGTAATCGGCGTGTCCGGGTCAAGCCAGGCCGCCTGCCCCGCTTCGTCGA                                                                                                    <  5:172620/149‑1
                                                                                                                                                   GGTAATCGGCGTGTCCGGGTCAAGCCAGGCCGCCTGCCCCGCTTCGTCGAGGATGAGCGGCCGACGCTAAATCATGGCCGCCTGGGTCACCACCGCGCAACTCAGCCATACCTGGTCCTGCACCGGATAGGCCTCCCACACCGCCGCA  >  1:280455/1‑148
                                                                                                                                                                                                                                                                                                       
TTCTGGTTGACCCCGGGGGAGGGCGCGTCGCTGTACTTTGCGGCGGTGTGGGAGGCCTATCCGGTGCAGGACCAGGTATGGCTGAGTTGCGCGGTGGTGACCCAGGCGGCCATGAATCAGCGTCGGCCGCTCATCCTCGACGAAGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/873967‑874115
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcgggTAATCGGCGTGTCCGGGTCAAGCCAGGCCGCCTGCCCCGCTTCGTCGAGGATGAGCGGCCGACGCTGATTCATGGCCGCCTGGGTCACCACCGCGCAACTCAGCCATACCTGGTCCTGCACCGGATAGGCCTCCCACACCGCCGCA  <  NC_002947/874150‑874005

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.