New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 874284 = | 47 (0.870) | 4 (0.090) | 4/216 | NT | 9.9% | intergenic (+21/‑138) | PP_0758/PP_0759 | hypothetical protein/hypothetical protein |
? | NC_002947 | 874348 = | 34 (0.760) | intergenic (+85/‑74) | PP_0758/PP_0759 | hypothetical protein/hypothetical protein |
GACTTACGCATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGG‑AGCGGGCTTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/874453‑874284 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tagg‑agcgggcttgcccgcgaaGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGG > NC_002947/874348‑874491 GACTTACGCATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGT < 3:292189/149‑1 ACTTACGCATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTA < 1:29628/149‑1 ACTTACGCATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTA < 2:34964/149‑1 ACTTACGCATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTA < 3:158372/149‑1 CTTACGCATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAG < 3:154547/149‑1 ACGCATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGG‑AG > 3:311402/1‑149 CGCATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGG‑AGC < 8:301911/149‑1 gATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGCCTGCCATAGCCGCAGGGAAGATTATCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACCATCATTGTAGC‑AGCGG > 7:198388/2‑149 ATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGG‑AGCGGG < 5:281654/149‑1 AAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGG‑AGCGGGCTT > 6:99031/1‑149 AAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCGAAAGGGGTAACACCATCATTGTAGG‑AGCGGGCTTG > 7:126952/1‑149 GCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGG‑AGCGGG < 3:9359/124‑1 GCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGG‑AGCGGG > 4:9359/1‑124 AAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGG‑AGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTT > 6:125102/1‑149 GCCCGCTCCTAAAGGGGTAACACGATCATTGTAGG‑AGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCA > 4:175987/1‑149 CCGCTCCTAAAGGGGTAACACGATCATTGTAGGTAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCAT > 1:41314/1‑149 GGGTAACACGATCATTGTAGG‑AGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTT < 5:125102/149‑1 GCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTG < 6:75401/149‑1 ctGGCTTGCCCGCGAAGAGTCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGG < 8:320697/147‑1 GGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCA < 5:117987/149‑1 GCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCAT > 7:171001/1‑149 GCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCAT < 2:241816/149‑1 GCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTG < 7:47330/135‑1 GCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTG > 8:47330/1‑135 CTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAG < 7:165011/100‑1 CTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAG > 8:165011/1‑100 GCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCC < 4:154547/147‑1 CCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGA < 7:80715/133‑1 CCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGA > 8:80715/1‑133 GCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGG > 8:220861/1‑149 GACTTACGCATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGG‑AGCGGGCTTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/874453‑874284 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tagg‑agcgggcttgcccgcgaaGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGG > NC_002947/874348‑874491 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |