| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 909533 = | 58 (1.070) | 3 (0.060) | 3/248 | NT | 5.4% | coding (41/2853 nt) | fruB | PTS fructose transporter subunit EI/HPr/IIA |
| ? | NC_002947 | 909594 = | 49 (0.950) | coding (102/2853 nt) | fruB | PTS fructose transporter subunit EI/HPr/IIA | |||||
GCGTACCATGGGGAATGGCGATGCCCTGGCCAAGGAAAGTGGAGCCTTGTGCCTCCCGGGCCTGCAGCCCTTGCAGGTAACCCTCGGCGACCAGGCCGTCCGCAACCAGCCGATCCGCCAGAAGGCGTAACGCCTCGGCCTTGTCGGCGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/909685‑909533‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctGGTCGCCGAGGGTTACCTGCAAGGGCTGCAGGCCCGGGAGGCACAAGGCTCCACTTTCCTTGGCCAGGGCATCGCCATTCCCCATGGTACGCCGCAAACACGTGACCTGGTGTATGCCACCGGCGTACGCCTGCTGCAGTTCCCC > NC_002947/909594‑909738 GCGTACCATGGGGAATGGCGATGCCCTGGCCAAGGAAAGTGGAGCCTTGTGCCTCCCGGGCCTGCAGCCCTTGCAGGTAACCCTCGGCGACCAGGCCGTCCGCAACCAGCCGATCCGCCAGAAGGCGTAACGCCTCGGCCTTGTCGGCG < 6:91183/149‑1 GACCAGGCCGTCCGCAACCAGCCGATCCGCCAGAAGGCGTAACGCCTCGGCCTTGTCGGCGGCCTGGTCGCCGAGGGTTACCTGCAAGGGCTGCAGGCCCGGGAGGCACAAGGCTCCACTTTCCTTGGCCAGGGCATCGCCATTCCCCA > 7:102249/1‑149 CAGGCCGTCCGCAACCAGCCGATCCGCCAGAAGGCGTAACGCCTCGGCCTTGTCGGCGGCCTGGTCGCCGAGGGTTACCTGCAAGGGCTGCAGGCCCGGGAGGCACAAGGCTCCACTTTCCTTGGCCAGGGCATCGCCATTC < 1:51859/142‑1 CAGGCCGTCCGCAACCAGCCGATCCGCCAGAAGGCGTAACGCCTCGGCCTTGTCGGCGGCCTGGTCGCCGAGGGTTACCTGCAAGGGCTGCAGGCCCGGGAGGCACAAGGCTCCACTTTCCTTGGCCAGGGCATCGCCATTC > 2:51859/1‑142 GCCTGGTCGCCGAGGGTTACCTGCAAGGGCTGCAGGCCCGGGAGGCACAAGGCTCCACTTTCCTTGGCCAGGGCATCGCCATTCCCCATGGTACGCCGCAAACACGTGACCTGGTGTATGCCACCGGCGTACGCCTGCTGCAGTTCCgc > 4:59851/1‑147 CCTGGTCGCCGAGGGTTACCTGCAAGGGCTGCAGGCCCGGGAGGCACAAGGCTCCACTTTCCTTGGCCAGGGCATCGCCATTCCCCATGGTACGCCGCAAACACGTGACCTGGTGTATGCCACCGGCGTACGCCTGCTGCAGTTCCC < 3:43193/147‑1 CTGGTCGCCGAGGGTTACCTGCAAGGGCTGCAGGCCCGGGAGGCACAAGGCTCCACTTTCCTTGGCCAGGGCATCGCCATTCCCCATGGTACGCCGCAAACATGTGACCTGGTGTATGCCACCGGCGTACGCCTGCTGCAGTTCCCC > 8:248233/1‑147 CTGGTCGCCGAGGGTTACCTGCAAGGGCTGCAGGCCCGGGAGGCACAAGGCTCCACTTTCCTTGGCCAGGGCATCGCCATTCCCCATGGTACGCCGCAAACATGGGACCTGGTGTATGCCACCGGCGTACGCCTGATGCAGTTCCCC > 8:243516/1‑147 GCGTACCATGGGGAATGGCGATGCCCTGGCCAAGGAAAGTGGAGCCTTGTGCCTCCCGGGCCTGCAGCCCTTGCAGGTAACCCTCGGCGACCAGGCCGTCCGCAACCAGCCGATCCGCCAGAAGGCGTAACGCCTCGGCCTTGTCGGCGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/909685‑909533‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctGGTCGCCGAGGGTTACCTGCAAGGGCTGCAGGCCCGGGAGGCACAAGGCTCCACTTTCCTTGGCCAGGGCATCGCCATTCCCCATGGTACGCCGCAAACACGTGACCTGGTGTATGCCACCGGCGTACGCCTGCTGCAGTTCCCC > NC_002947/909594‑909738 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |