| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 959364 = | 63 (1.160) | 4 (0.080) | 4/252 | NT | 6.3% | coding (169/540 nt) | PP_5460 | membrane protein |
| ? | NC_002947 | 959419 = | 58 (1.110) | coding (224/540 nt) | PP_5460 | membrane protein | |||||
ACCAAAGCCGGTAAGGTCATGAAACTCATAGCTGCTGTTATCCGGCAAGCGGTCGATGCCAAAACTGCTGGCAGCCAGATACGCCGCCCCAAGCCCGGCCAGCAAGGCCAGCCGGCGAAACCGCCGATGAGCCAGGATGGCCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/959510‑959364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcTTGGGGCGGCGTATCTGGCTGCCAGCAGTTTTGGCATCGACCGCTTGCCGGATAACAGCAGCTATGAGTTTCATGACCTTACCGGCTTTGGTGCTGGCTTCTACCTGTGGCTGGTAGCGATGGTGGTGTTTTGCCTGGGGCAAGC > NC_002947/959419‑959563 ACCAAAGCCGGTAAGGTCATGAAACTCATAGCTGCTGTTATCCGGCAAGCGGTCGATGCCAAAACTGCTGGCAGCCAGATACGCCGCCCCAAGCCCGGCCAGCAAGGCCAGCCGGCGAAACCGCCGATGAGCCAGGATGGCCAGGGC > 1:189020/1‑147 CCGGCCAGCAAGGCCAGCCGGCGAAACCGCCGATGAGCCAGGATGGCCAGGGCTTGGGGCGGCGTATCTGGCTGCCAGCAGTTTTGGCATCGACCGCTTGCCGGATAACAGCAGCTAT > 2:243352/1‑118 CCGGCCAGCAAGGCCAGCCGGCGAAACCGCCGATGAGCCAGGATGGCCAGGGCTTGGGGCGGCGTATCTGGCAGCCAGCAGTTTTGGCATCGACCGCTTGCCGGATAACAGCAGCTAT < 1:243352/118‑1 CAGCCGGCGAAACCGCCGATGAGCCAGGATGGCCAGGGCTTGGGGCGGCGTATCTGGCTGCCAGCAGTTTTGGCATCGCCCGCTTGCCGGATAACAGCAGCTATGAGTTTCATGACCTTACCGGCTTTGGTGCTGGCTTCTACCTGTGG > 2:7150/1‑149 GCCAGGATGGCCAGGGCTTGGGGCGGCGTATCTGGCTGCCAGCAGTTTTGGCATCGACCGCTTGCCGGATAACAGCAGCTATGAGTTTCATGACCTTACCGGCTTTGGTGCTGGCTTCTACCTGTGGCTGGTAGCGATGGTGGTGTTTT < 1:7150/149‑1 GGGCTTGGGGCGGCGTATCTGGCTGCCAGCAGTTTTGGCATCGACCGCTTGCCGGATAACAGCAGCTATGAGTTTCATGACCTTACCGGCTTTGGTGCTGGCTTCTACCTGTGGCTGGTAGCGATGGTGGTGTTTTGCCTGGGGCAAGC < 6:288741/149‑1 ACCAAAGCCGGTAAGGTCATGAAACTCATAGCTGCTGTTATCCGGCAAGCGGTCGATGCCAAAACTGCTGGCAGCCAGATACGCCGCCCCAAGCCCGGCCAGCAAGGCCAGCCGGCGAAACCGCCGATGAGCCAGGATGGCCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/959510‑959364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcTTGGGGCGGCGTATCTGGCTGCCAGCAGTTTTGGCATCGACCGCTTGCCGGATAACAGCAGCTATGAGTTTCATGACCTTACCGGCTTTGGTGCTGGCTTCTACCTGTGGCTGGTAGCGATGGTGGTGTTTTGCCTGGGGCAAGC > NC_002947/959419‑959563 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |