New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 998060 | 57 (1.050) | 3 (0.060) | 3/248 | NT | 5.1% | coding (2059/2292 nt) | PP_0861 | outer membrane ferric siderophore receptor |
? | NC_002947 | = 998090 | 57 (1.110) | coding (2029/2292 nt) | PP_0861 | outer membrane ferric siderophore receptor |
GTACACCTCGTTGGTCAGGTTCTGCACGTTCAGTTGCAGGTCGACGTTCTTGGTCAGCTTGTAGGCGGCCATGGCGTCGTAGCGTACGTAGCTGTCGACCATGGTGGTGTTGGCCACGCTGCCGTACACGTCATCCACGTAGAACGCACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/997908‑998060 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaccTACTCGATCACGCCAAAGCTGACCGTGGGCGGTGGTGCGTTCTACGTGGATGACGTGTACGGCAGCGTGGCCAACACCACCATGGTCGACAGCTACGTACGCTACGACGCCATGGCCGCCTACAAGCTGACCAAGAACGTCGACCT < NC_002947/998090‑997945 GTACACCTCGTTGGTCAGGTTCTGCACGTTCAGTTGCAGGTCGACGTTCTTGGTCAGCTTGTAGGCGGCCATGGCGTCGTAGCGTACGTAGCTGTCGACCATGGTGGTGTTGGCCACGCTGCCGTACACGTCATCCACGTAGAACGCAC > 4:88378/1‑149 TACACCTCGTTGGTCAGGTTCTGCACGTTCAGTTGCAGGTCGACGTTCTTGGTCAGCTTGTAGGCGGCCATGGCGTCGTAGCGTACGTAGCTGTCGACCATGGTGATGTTGGCCACGCTGCCGTACACGTCATCCACGTAGAACGCAC > 7:262488/1‑148 CACCTCGTTGGTCAGGTTCTGCACGTTCAGTTGCAGGTCGACGTTCTTGGTCAGCTTGTAGGCGGCCATGGCGTCGTAGCGTACGTAGCTGTCGACCATGGTGGTGTTGGCCACGCTGCCGTACACGTCATCCACGTAGAACGCACCAC < 5:136151/149‑1 GACGTTCTTGGTCAGCTTGTAGGCGGCCATGGCGTCGTAGCGTACGTAGCTGTCGACCATGGTGGTGTTGGCCACGCTGCCGTACACGTCATCCACGTAGAACGCACCACCTACTCGATCACGCCAAAGCTGACCGTGGGCGGTGGTG < 1:51979/148‑1 GTTCTTGGTCAGCTTGTAGGCGGCCATGGCGTCGTAGCGTACGTAGCTGTCGACCATGGTGGTGTTGGCCACGCTGCCGTACACGTCATCCACGTAGAACGCACCACCTACTCGATCACGCCAAAGCTGACCGTGGGCGGTGGT > 3:316958/1‑144 GTTCTTGGTCAGCTTGTAGGCGGCCATGGCGTCGTAGCGTACGTAGCTGTCGACCATGGTGGTGTTGGCCACGCTGCCGTACACGTCATCCACGTAGAACGCACCACCTACTCGATCACGCCAAAGCTGACCGTGGGCGGTGGT < 4:316958/144‑1 CCACCTACTCGATCACGCCAAAGCTGACCGTGGGCGGTGGTGCGTTCTACGTGGATGACGTGTACGGCAGCGTGGCCAACACCACCATGGTCGACAGCTACGTACGCTACGACGCCATGGCCGCCTACAAGCTGACCAAGAACGTCGAC < 6:151958/149‑1 CACCTACTCGATCACGCCAAAGCTGACCGTGGGCGGTGGTGCGTTCTACGTGGATGACGTGTACGGCAGCGTGGCCAACACCACCATGGTCGACAGCTACGTACGCTACGACGCCATGGCCGCCTACAAGCTGACCAAGAACGTCGACC > 7:75731/1‑149 CACCTACTCGATCACGCCAAAGCTGACCGTGGGCGGTGGTGCGTTCTACGTGGATGACGTGTACGGCAGCGTGGCCAACACCACCATGGTCGACAGCTACGTACGCTACGACGCCATGGCCGCCTACAAGCTGACCAAGAACGTCGACC > 8:278130/1‑149 ACCTACTCGATCACGCCAAAGCTGACCGTGGGCGGTGGTGCGTTCTACGTGGATGACGTGTACGGCAGCGTGGCCAACACCACCATGGTCGTCAGCTACGTACGCTACGACGCCATGGCCGCCTACAAGCTGACCAAGAACGTCGACCT < 6:18160/149‑1 GTACACCTCGTTGGTCAGGTTCTGCACGTTCAGTTGCAGGTCGACGTTCTTGGTCAGCTTGTAGGCGGCCATGGCGTCGTAGCGTACGTAGCTGTCGACCATGGTGGTGTTGGCCACGCTGCCGTACACGTCATCCACGTAGAACGCACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/997908‑998060 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaccTACTCGATCACGCCAAAGCTGACCGTGGGCGGTGGTGCGTTCTACGTGGATGACGTGTACGGCAGCGTGGCCAACACCACCATGGTCGACAGCTACGTACGCTACGACGCCATGGCCGCCTACAAGCTGACCAAGAACGTCGACCT < NC_002947/998090‑997945 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |