New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 99806057 (1.050)3 (0.060) 3/248 NT 5.1% coding (2059/2292 nt) PP_0861 outer membrane ferric siderophore receptor
?NC_002947 = 998090 57 (1.110)coding (2029/2292 nt) PP_0861 outer membrane ferric siderophore receptor

GTACACCTCGTTGGTCAGGTTCTGCACGTTCAGTTGCAGGTCGACGTTCTTGGTCAGCTTGTAGGCGGCCATGGCGTCGTAGCGTACGTAGCTGTCGACCATGGTGGTGTTGGCCACGCTGCCGTACACGTCATCCACGTAGAACGCACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/997908‑998060
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaccTACTCGATCACGCCAAAGCTGACCGTGGGCGGTGGTGCGTTCTACGTGGATGACGTGTACGGCAGCGTGGCCAACACCACCATGGTCGACAGCTACGTACGCTACGACGCCATGGCCGCCTACAAGCTGACCAAGAACGTCGACCT  <  NC_002947/998090‑997945
                                                                                                                                                                                                                                                                                                           
GTACACCTCGTTGGTCAGGTTCTGCACGTTCAGTTGCAGGTCGACGTTCTTGGTCAGCTTGTAGGCGGCCATGGCGTCGTAGCGTACGTAGCTGTCGACCATGGTGGTGTTGGCCACGCTGCCGTACACGTCATCCACGTAGAACGCAC                                                                                                                                                        >  4:88378/1‑149
 TACACCTCGTTGGTCAGGTTCTGCACGTTCAGTTGCAGGTCGACGTTCTTGGTCAGCTTGTAGGCGGCCATGGCGTCGTAGCGTACGTAGCTGTCGACCATGGTGATGTTGGCCACGCTGCCGTACACGTCATCCACGTAGAACGCAC                                                                                                                                                        >  7:262488/1‑148
   CACCTCGTTGGTCAGGTTCTGCACGTTCAGTTGCAGGTCGACGTTCTTGGTCAGCTTGTAGGCGGCCATGGCGTCGTAGCGTACGTAGCTGTCGACCATGGTGGTGTTGGCCACGCTGCCGTACACGTCATCCACGTAGAACGCACCAC                                                                                                                                                     <  5:136151/149‑1
                                          GACGTTCTTGGTCAGCTTGTAGGCGGCCATGGCGTCGTAGCGTACGTAGCTGTCGACCATGGTGGTGTTGGCCACGCTGCCGTACACGTCATCCACGTAGAACGCACCACCTACTCGATCACGCCAAAGCTGACCGTGGGCGGTGGTG                                                                                                               <  1:51979/148‑1
                                             GTTCTTGGTCAGCTTGTAGGCGGCCATGGCGTCGTAGCGTACGTAGCTGTCGACCATGGTGGTGTTGGCCACGCTGCCGTACACGTCATCCACGTAGAACGCACCACCTACTCGATCACGCCAAAGCTGACCGTGGGCGGTGGT                                                                                                                >  3:316958/1‑144
                                             GTTCTTGGTCAGCTTGTAGGCGGCCATGGCGTCGTAGCGTACGTAGCTGTCGACCATGGTGGTGTTGGCCACGCTGCCGTACACGTCATCCACGTAGAACGCACCACCTACTCGATCACGCCAAAGCTGACCGTGGGCGGTGGT                                                                                                                <  4:316958/144‑1
                                                                                                                                                    CCACCTACTCGATCACGCCAAAGCTGACCGTGGGCGGTGGTGCGTTCTACGTGGATGACGTGTACGGCAGCGTGGCCAACACCACCATGGTCGACAGCTACGTACGCTACGACGCCATGGCCGCCTACAAGCTGACCAAGAACGTCGAC    <  6:151958/149‑1
                                                                                                                                                     CACCTACTCGATCACGCCAAAGCTGACCGTGGGCGGTGGTGCGTTCTACGTGGATGACGTGTACGGCAGCGTGGCCAACACCACCATGGTCGACAGCTACGTACGCTACGACGCCATGGCCGCCTACAAGCTGACCAAGAACGTCGACC   >  7:75731/1‑149
                                                                                                                                                     CACCTACTCGATCACGCCAAAGCTGACCGTGGGCGGTGGTGCGTTCTACGTGGATGACGTGTACGGCAGCGTGGCCAACACCACCATGGTCGACAGCTACGTACGCTACGACGCCATGGCCGCCTACAAGCTGACCAAGAACGTCGACC   >  8:278130/1‑149
                                                                                                                                                      ACCTACTCGATCACGCCAAAGCTGACCGTGGGCGGTGGTGCGTTCTACGTGGATGACGTGTACGGCAGCGTGGCCAACACCACCATGGTCGTCAGCTACGTACGCTACGACGCCATGGCCGCCTACAAGCTGACCAAGAACGTCGACCT  <  6:18160/149‑1
                                                                                                                                                                                                                                                                                                           
GTACACCTCGTTGGTCAGGTTCTGCACGTTCAGTTGCAGGTCGACGTTCTTGGTCAGCTTGTAGGCGGCCATGGCGTCGTAGCGTACGTAGCTGTCGACCATGGTGGTGTTGGCCACGCTGCCGTACACGTCATCCACGTAGAACGCACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/997908‑998060
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaccTACTCGATCACGCCAAAGCTGACCGTGGGCGGTGGTGCGTTCTACGTGGATGACGTGTACGGCAGCGTGGCCAACACCACCATGGTCGACAGCTACGTACGCTACGACGCCATGGCCGCCTACAAGCTGACCAAGAACGTCGACCT  <  NC_002947/998090‑997945

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.