| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1070679 = | 50 (0.920) | 5 (0.100) | 5/248 | NT | 8.3% | coding (707/1044 nt) | PP_0928 | K+‑dependent Na+/Ca+ exchanger‑like protein |
| ? | NC_002947 | 1070756 = | 63 (1.220) | coding (630/1044 nt) | PP_0928 | K+‑dependent Na+/Ca+ exchanger‑like protein | |||||
CCATCGAGGTGGCCACCGACCTGGGCCTGTCCGAGCGTATTATCGGCCTGACGGTCGTCGCCATCTGCACCTCCCTGCCGGAACTGGCCGCTGCGCTGATCGCCGCCTTGCGTGGCGAACGGGAGATCGCGGTGGGCACGGTGATCGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1070829‑1070679‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcagGGAGGTGCAGATGGCGACGACCGTCAGGCCGATAATACGCTCGGACAGGCCCAGGTCGGTGGCCACCTCGATGGCAGCTTCCAGTAGCAAGTGGCCCGCCAGGCTCAGCAGGCCAAGGCCGACCAGTATCTGCAGCAGCGTAC > NC_002947/1070756‑1070898 CCATCGAGGTGGCCACCGACCTGGGCCTGTCCGAGCGTATTATCGGCCTGACGGTCGTCGCCATCTGCACCTCCCTGCCGGAACTGGCCGCTGCGCTGATCGCCGCCTTGCGTGGCGAACGGGAGATCGCGGTGGGCACGGTGATCGGC < 5:338108/149‑1 CTCCCTGCCGGAACTGGCCGCTGCGCTGATCGCCGCCTTGCGTGGCGAACGGGAGATCGCGGTGGGCACGGTGATCGGCAGGGAGGTGCAGATGGCGACGACCGTCAGGCCGATAATACGCTCGGA < 1:79337/126‑1 CTCCCTGCCGGAACTGGCCGCTGCGCTGATCGCCGCCTTGCGTGGCGAACGGGAGATCGCGGTGGGCACGGTGATCGGCAGGGAGGTGCAGATGGCGACGACCGTCAGGCCGATAATACGCTCGGA > 2:79337/1‑126 TCCCTGCCGGAACTGGCCGCTGCGCTGATCGCCGCCTTGCGTGGCGAACGGGAGATCGCGGTGGGCACGGTGATCGGCAGGGAGGTGCAGATGGCGACGACCGTCAGGCCGATAATACGCTCGGACAGGCCCAG > 1:167057/1‑134 TCCCTGCCGGAACTGGCCGCTGCGCTGATCGCCGCCTTGCGTGGCGAACGGGAGATCGCGGTGGGCACGGTGATCGGCAGGGAGGTGCAGATGGCGACGACCGTCAGGCCGATAATACGCTCGGACAGGCCCAG < 2:167057/134‑1 TGCCGGAACTGGCCGCTGCGCTGATCGCCGCCTTGCGTGGCGAACGGGAGATCGCGGTGGGCACGGTGATCGGCAGGGAGGTGCAGATGGCGACGACCGTCAGGCAGATAATACGCTCGGACAGGCCCAGGTCGGTGGCCACCTCGATG > 1:53153/1‑149 CGGCAGGGAGGTGCAGATGGCGACGACCGTCAGGCCGATAATACGCTCGGACAGGCCCAGGTCGGTGGCCACCTCGATGGCAGCTTCCAGTAGCAAGTGGCCCGCCAGGCTCAGCAGGCCAAGGCCGACCAGTATCTGCAGCAGCGTAC > 2:146488/1‑149 CGGCAGGGAGGTGCAGATGGCGACGACCGTCAGGCCGATAATACGCTCGGACAGGCCCAGGTCGGTGGCCACCTCGATGGCAGCTTCCAGTAGCAAGTGGCCCGCCAGGCTCAGCAGGCCAAGGCCGACCAGTATCTGCAGCAGCGTAC < 5:78701/149‑1 CCATCGAGGTGGCCACCGACCTGGGCCTGTCCGAGCGTATTATCGGCCTGACGGTCGTCGCCATCTGCACCTCCCTGCCGGAACTGGCCGCTGCGCTGATCGCCGCCTTGCGTGGCGAACGGGAGATCGCGGTGGGCACGGTGATCGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1070829‑1070679‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcagGGAGGTGCAGATGGCGACGACCGTCAGGCCGATAATACGCTCGGACAGGCCCAGGTCGGTGGCCACCTCGATGGCAGCTTCCAGTAGCAAGTGGCCCGCCAGGCTCAGCAGGCCAAGGCCGACCAGTATCTGCAGCAGCGTAC > NC_002947/1070756‑1070898 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |