| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1101478 = | 61 (1.130) | 3 (0.060) | 3/246 | NT | 5.1% | coding (59/486 nt) | mlaD | phospholipid ABC transporter substrate‑binding protein |
| ? | NC_002947 | 1101532 = | 54 (1.060) | coding (113/486 nt) | mlaD | phospholipid ABC transporter substrate‑binding protein | |||||
CGGTAACCTTGCCGATGGTCACACCGGCCATGGTCACTTTAGCTCTGACCGTCAAACCGGCGATATTGTCGAAGTAAGCATAAACTTTATAGGTATCGCTGCTCGGGCTGGCCGACAGCCCGCTGACACGCAGGGCCAGCAGCAGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1101627‑1101478‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagcgATACCTATAAAGTTTATGCTTACTTCGACAATATCGCCGGTTTGACGGTCAGAGCTAAAGTGACCATGGCCGGTGTGACCATCGGCAAGGTTACCGC > NC_002947/1101532‑1101628 CGGTAACCTTGCCGATGGTCACACCGGCCATGGTCACTTTAGCTCTGACCGTCAAACCGGCGATATTGTCGAAGTAAGCATAAACTTTATAGGTATCGCTGCTCGGGCTGGCCGACAGCCCGCTGACACGCAGGGCCAGCAGCAGCAGC > 4:96744/1‑149CGGTAACCTTGCCGATGGTCACACCGGCCATGGTCACTTTAGCTCTGACCGTCAAACCGGCGATATAGTCGAAGTAAGCATAAACTTTATAGGTATCGCTGCTCGGGCTGGCCGACAGCCCGCTGACACGCAGGTCCAGCAGCAGCAGC > 5:232945/1‑149 TCGCTGCTCGGGCTGGCCGACAGCCCGCTGACACGCAGGGCCAGCAGCAGCAGCGATACCTATAAAGTTTATGCTTACTTCGACAATATCGCCGGTTTGACGGTCAGAGCTAAAGTGACCATGGCCGGTGTGACCATCGGCAAG < 5:264939/144‑1 TCGCTGCTCGGGCTGGCCGACAGCCCGCTGACACGCAGGGCCAGCAGCAGCAGCGATACCTATAAAGTTTATGCTTACTTCGACAATATCGCCGGTTTGACGGTCAGAGCTAAAGTGACCATGGCCGGTGTGACCATCGGCAAG > 6:264939/1‑144 TGCTCGGGCTGGCCGACAGCCCGCTGACACGCAGGGCCAGCAGCAGCAGCGATACCTATAAAGTTTATGCTTACTTCGACAATATCGCCGGTTTGACGGTCAGAGCTAAAGTGACCATGGCCGGTGTGACCATCGGCAAGGTTACCGC > 1:248265/1‑148 CGGTAACCTTGCCGATGGTCACACCGGCCATGGTCACTTTAGCTCTGACCGTCAAACCGGCGATATTGTCGAAGTAAGCATAAACTTTATAGGTATCGCTGCTCGGGCTGGCCGACAGCCCGCTGACACGCAGGGCCAGCAGCAGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1101627‑1101478‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagcgATACCTATAAAGTTTATGCTTACTTCGACAATATCGCCGGTTTGACGGTCAGAGCTAAAGTGACCATGGCCGGTGTGACCATCGGCAAGGTTACCGC > NC_002947/1101532‑1101628 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |