New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1105890 =	62 (1.150)	4 (0.080)	3/248	NT	6.2%	coding (370/1326 nt)	hisD	histidinol dehydrogenase
	?	NC_002947	1105924 =	62 (1.200)					coding (404/1326 nt)	hisD	histidinol dehydrogenase

ACCTCACCCCGCGGGGTCGGCACCACCATCACCACTTCAGTCACGCCGGCAACCTTGGCCGGGATGGCGTTCATCAGCACCGACGACGGGTACGACGCCTTGCCGCCCGGCACATACAGGCCAGCACGGTCCAGCGGGGTGACCTTCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1106041‑1105890 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCCAAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCCGCGGGGTGAGGTCAACGAGCTGGTACTGGCGGCTGCCTGCAT  >  NC_002947/1105924‑1106071                                                                                                                                                                                                                                                                                                              agCTCACGCCGCGGGGTCGGCACCACCATCACCACTTCAGTCAGGGCGGCAACCTTGGCCGGGATGGCGTTCATCTGCACGGACGACGGGTACGACGCGTTGCCGCCCGGCACATAGAGGCCAGCACGGTCCAGCGGGGTGACCTTCT                                                                                                                                                          <  8:137068/146‑1  CCTCACCCCGCGGGGTCGGCACCACCATCACCACTTCAGTCACGCCGGCAACCTTGGCCGGGATGGCGTTCATCAGCACCGACGACGGGTACGACGCCTTGCCGCCCGGCACATACAGGCCAGCACGGTCCAGCTGGGTGACCTTCTGG                                                                                                                                                        <  2:49159/149‑1   CTCACCCCGCGGGGTCGGCACCACCATCACCACTTCAGTCACGCCGGCAACCTTGGCCGGGATGGCGTTCATCAGCACCGACGACGGGTACGACGCCTTGCCGCCCGGCACATACAGGCCAGCACGGTCCAGCGGGGTGACCTTCTGGC                                                                                                                                                       >  5:291604/1‑149    TCACCCCGCGGGGTCGGCACCACCATCACCACTTCAATCACGCCGGCAACCTTGGCCGGGATGGCGTTCATCAGCACCGACGACGGGTACGACGCCTTGCCGCCCGGCACATACAGGCCAGCACGGTCCAGCGGGGTGACCTTCTGGCC                                                                                                                                                      >  1:231413/1‑149                                                                                                              GCACATACAGGCCAGCACGGTCCAGCGGGGTGACCTTCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCCAAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCC                                            >  1:21696/1‑149                                                                                                                  ATACAGGCCAGCACGGTCCAGCGGGGTGACCTTCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCCAAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCCGCGG                                        >  5:16798/1‑149                                                                                                                  ATACAGGCCAGCACGGTCCAGCGGGGTGACCTTCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCCAAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCCGCGG                                        >  5:212675/1‑149                                                                                                                     CAGGCCAGCACGGTCCAGCGGGGTGACCTTCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCCAAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCCGCGGGGT                                     <  2:21696/149‑1                                                                                                                                                   CTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCCAAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCCGCGGGGTGAGGTCAACGAGCTGGTACTGGCGGCTGC        <  4:97255/148‑1                                                                                                                                                      GCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCCAAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCCGCGGGGTGAGGTCAACGAGCTGGTACTGGCGGCTGCCT      <  5:160406/147‑1                                                                                                                                                        CTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCCAAGGTTTCAGGCGTGACTGAAGTGGTTAAGCTGGTGCCGACCCCGCGCGGTGAGGTCAACGAGCTGGTACTGGAGGCTGCCTGCAT  >  2:86469/1‑149                                                                                                                                                        CTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCCAAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCCGCGGGGTGAGGTCAACGAGCTGGTACTGGCGGCTGCCTGCAT  >  6:36971/1‑149                                                                                                                                                        CTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCCAAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCCGCGGGGTGAGGTCAACGAGCTGGTACTGGCGGCTGCCTGCAT  >  8:4941/1‑149                                                                                                                                                                                                                                                                                                              ACCTCACCCCGCGGGGTCGGCACCACCATCACCACTTCAGTCACGCCGGCAACCTTGGCCGGGATGGCGTTCATCAGCACCGACGACGGGTACGACGCCTTGCCGCCCGGCACATACAGGCCAGCACGGTCCAGCGGGGTGACCTTCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1106041‑1105890 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCCAAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCCGCGGGGTGAGGTCAACGAGCTGGTACTGGCGGCTGCCTGCAT  >  NC_002947/1105924‑1106071

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.