| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1235224 | 52 (0.960) | 3 (0.060) | 3/246 | NT | 5.6% | coding (62/1500 nt) | glpK | glycerol kinase |
| ? | NC_002947 | = 1235248 | 52 (1.020) | coding (38/1500 nt) | glpK | glycerol kinase | |||||
CCCGCCTGGGCAAGGGCCTCGACCATGGTGGCGCTTTGTGTGGCGAAAATCTCCATCGGGTCATGCTCGACC‑‑CAGCCCGCCTGCGGGTAATGCTGTGCGAACTCGCGCTGGGAGGTACCTACAACATTGGCGTCACGGTCGAAAATGATCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1235071‑1235224‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgcccTGGACCAGGGTACCACCAGTTCGCGGGCGATCATTTTCGACCGTGACGCCAATGTTGTAGGTACCTCCCAGCGCGAGTTCGCACAGCATTACCCGCAGGCGGGCTGGGTCGAGCATGACCCGATGGAGATTTTCGCCACACAAAGCGC < NC_002947/1235248‑1235101 CCCGCCTGGGCAAGGGCCTCGACCATGGTGGCGCTTTGTGTGGCGAAAATCTCCATCGGGTCATGCTCGACC‑‑CAGCCCGCCTGCGGGTAATGCTGTGCGAACTCGCGCTGGGAGGTACCTACAACATTGGCGTCACGGTCGAAAATGA < 7:231657/148‑1 CCGCCTGGGCAAGGGCCTCGACCATGGTGGCGCTTTGTGTGGCGAAAATCTCCATCGGGTCATGCTCGACC‑‑CAGCCCGCCTGCGGGTAATGCTGTGCGAACTCGCGCTGGGAGGTACCTACAACATTGGCGTCACGGTCGAAAATGATC < 5:50551/149‑1 CTGGGCAAGGGCCTCGACCATGGTGGCGCTTTGTGTGGCGAAAATCTCCATCGGGTCATGCTCGACCGGGAGCCCGCCTGCGGGTAATGATTTGCGAACTCGCGCTGGGAGGTACCTACAACATTGGCGTCACGGTCGAAAATTATCGC > 1:279887/1‑149 CTGGGCAAGGGCCTCGACCATGGTGGCGCTTTGTGTGGCGAAAATCTCCATCGGGTCATGCTCGACC‑‑CAGCCCGCCTGCGGGTAATGCTGTGCGAACTCGCGCTGGGAGGTACCTACAACATTGGCGTCACGGTCGAAAATGATCGCCC < 6:47903/149‑1 TGTGGCGAAAATCTCCATCGGGTCATGCTCGACC‑‑CAGCCCGCCTGCGGGTAATGCTGTGCGAACTCGCGCTGGGAGGTACCTACAACATTGGCGTCACGGTCGAAAATGATCGCCCTGGACCAGGGTACCACCAGTTCGCGGGCGATCA < 7:89469/149‑1 TGTGCGAACTCGCGCTGGGAGGTACCTACAACATTGGCGTCACGGTCGAAAATGATCGCCCTGGACCAGGGTACCACCAGTTCGCGG > 5:180845/1‑87 TGTGCGAACTCGCGCTGGGAGGTACCTACAACATTGGCGTCACGGTCGAAAATGATCGCCCTGGACCAGGGTACCACCAGTTCGCGG < 6:180845/87‑1 ATCGCCCTGGACCAGGGTACCACCAGTTCGCGGGCGATCATTTTCGACCGTGACGCCAATGTTGTAGGTACCTCCCAGCGCGAGTTCGCACAGCATTACCCGCAGGCGGGCTGGGTCGAGCATGACCCGATGGAGATTTTCGCCACAC > 2:52060/1‑148 CCCTGGACCAGGGTACCACCAGTTCGCGGGCGATCATTTTCGACCGTGACGCCAATGTTGTAGGTACCTCCCAGCGCGAGTTCGCACAGCATTACCCGCAGGCGGGCTGGGTCGAGCATGACCCGATGGAGATTTTCGCCACACAAAGC < 5:253591/149‑1 CCCTGGACCAGGGTACCACCAGTTCGCGGGCGATCATTTTCGACCGTGACGCCAATGTTGTAGGTACCTCCCAGCGCGAGTTCGCACAGCATTACCCGCAGGCGGGCTGGGTCGAGCATGACCCGATGGAGATTTTCGCCACACAAAGC > 8:247027/1‑149 CTGGACCAGGGTACCACCAGTTCGCGGGCGATCATTTTCGACCGTGACGCCAATGTTGTAGGTACCTCCCAGCGCGAGTTCGCACAGCATTACCCGCAGGCGGGCTGCGTCGAGCATGAGCCCATGGAGAATTTCGCCACACAAAGCGC > 4:235902/1‑149 CCCGCCTGGGCAAGGGCCTCGACCATGGTGGCGCTTTGTGTGGCGAAAATCTCCATCGGGTCATGCTCGACC‑‑CAGCCCGCCTGCGGGTAATGCTGTGCGAACTCGCGCTGGGAGGTACCTACAACATTGGCGTCACGGTCGAAAATGATCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1235071‑1235224‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgcccTGGACCAGGGTACCACCAGTTCGCGGGCGATCATTTTCGACCGTGACGCCAATGTTGTAGGTACCTCCCAGCGCGAGTTCGCACAGCATTACCCGCAGGCGGGCTGGGTCGAGCATGACCCGATGGAGATTTTCGCCACACAAAGCGC < NC_002947/1235248‑1235101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |