New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1260815	56 (1.040)	4 (0.080)	4/244	NT	7.6%	coding (636/2451 nt)	PP_1103	DEAD box family ATP‑dependent helicase
	?	NC_002947	= 1260846	45 (0.890)					coding (605/2451 nt)	PP_1103	DEAD box family ATP‑dependent helicase

GCGCGGGTGTTGGTGAACACCAGGCTACTGGCACTGGCATCGATCTCGTGACAGACCTGGTCGAGCATCTTCAGGCCCATGTGTCCAGCCCAAGGGAAGCGCTCGATCGCTTTTGGCAGCAGGGTGTCGACTTGCAGTGCCTTGTCTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1260666‑1260815 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcttgcTGCCCCAGGGCGGCCTGCTGGTGCAAGGCCGGCAAGACAAGGCACTGCAAGTCGACACCCTGCTGCCAAAAGCGATCGAGCGCTTCCCTTGGGCTGGACACATGGGCCTGAAGATGCTCGACCAGGTCTGTCACGAGATCGATGC  <  NC_002947/1260846‑1260702                                                                                                                                                                                                                                                                                                         GCGCGGGTGTTGGTGAACACCAGGCTACTGGCACTGGCATCGATCTCGTGACAGACCTGGTCGAGCATCTTCAGGCCTATGTGTCCAGCCCAAGGGAAGCGCTCGATCGCTTTTGGCAGCAGGGTGTCGACTTGCAGTGCCTTGTCTTG                                                                                                                                                    >  2:320137/1‑149             GTGAACACCAGGCTACTGGCACTGGCATCGATCTCGTGACAGACCTGGTCGAGCATCTTCAGGCCCATGTGTCCAGCCCAAGGGAAGCGCTCGATCGCTTTTGGCAGCAGGGTGTCGACTTGCAGTGCCTTGTCTTGCTGCCCCAGGGC                                                                                                                                        >  1:160798/1‑149                     CAGGCTACTGGCACTGGCATCGATCTCGTGACAGACCTGGTCGAGCATCTTCAGGCCCATGTGTCCAGCCCAAGGGAAGCGCTCGATCGCTTTTGGCAGCAGGGTGTCGACTTGCAGTGCCTTGTCTTGC                                                                                                                                                   <  3:73523/130‑1                     CAGGCTACTGGCACTGGCATCGATCTCGTGACAGACCTGGTCGAGCATCTTCAGGCCCATGTGTCCAGCCCAAGGGAAGCGCTCGATCGCTTTTGGCAGCAGGGTGTCGACTTGCAGTGCCTTGTCTTGC                                                                                                                                                   >  4:73523/1‑130                                   TGGCATCGATCTCGTGACAGACCTGGTCGAGCATCTTCAGGCCCATGTGTCCAGCCCAAGGGAAGCGCTCGATCGCTTTTGGCAGCAGGGTGTCGACTTGCAGTGCCTTGTCTTGCTGCCCCAGGGCGGCCTGCTGGTGCAAGGCCGG                                                                                                                   >  4:288600/1‑148                                            TCTCGTGACAGACCTGGTCGAGCATCTTCAGGCCCATGTGTCCAGCCCAATGGAAGCGCTCGATCGCTTTTGGCAGCAGGGTGTCGACTTGCAGTGCCTTGTCTTGCTGCCCCAGGGCGGCCTGCTGGTGCAAGTCCGGCAAGACAAG                                                                                                          <  2:160798/148‑1                                                GTGACAGACCTGGTCGAGCATCTTCAGGCCCATGTGTCCAGCCCAAGGGAAGCGCTCGATCGCTTTTGGCAGCAGGGTGTCGACTTGCAGTGCCTTGTCTTGCTGCCCCAGGGCGGCCTGCTGGTGCAAGGCCGGCAAGACAA                                                                                                           <  3:288600/143‑1                                                                                                                                                  CTTGCTGCCCCAGGGCGGCCTGCTGGTGCAAGGCCGGCAAGACAAGGCACTGCAAGTCGACACCCTGCTGCCAAAAGCGATCGAGCGCTTCCCGTGGGCTGGACACATGGGCCTGAAGATGCTCGACCAGGTCTGTCACGAGATCGATG   >  3:203681/1‑149                                                                                                                                                   TTGCTGCCCCAGGGCGGCCTGCTGGTGCAAGGCCGGCAAGACAAGGCACTGCAAGTCGACACCCTGCTGCCAAAAGCGATCGAGCGCTTCCCTTGGGCTGGACACATGGGCCTGAAGATGCTCGACCAGGTCTGTCACGAGATCGATGC  >  5:253210/1‑149                                                                                                                                                   TTGCTGCCCCAGGGCGGCCTGCTGGTGCAAGGCCGGCAAGACAAGGCACTGCAAGTCGACACCCTGCTGCCAAAAGCGATCGAGCGCTTCCCTTGGGCTGGACACATGGGCCTGAAGATGCTCGACCAGGTCTGTCACGAGA         <  5:117144/142‑1                                                                                                                                                   TTGCTGCCCCAGGGCGGCCTGCTGGTGCAAGGCCGGCAAGACAAGGCACTGCAAGTCGACACCCTGCTGCCAAAAGCGATCGAGCGCTTCCCTTGGGCTGGACACATGGGCCTGAAGATGCTCGACCAGGTCTGTCACGAGA         >  6:117144/1‑142                                                                                                                                                                                                                                                                                                         GCGCGGGTGTTGGTGAACACCAGGCTACTGGCACTGGCATCGATCTCGTGACAGACCTGGTCGAGCATCTTCAGGCCCATGTGTCCAGCCCAAGGGAAGCGCTCGATCGCTTTTGGCAGCAGGGTGTCGACTTGCAGTGCCTTGTCTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1260666‑1260815 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcttgcTGCCCCAGGGCGGCCTGCTGGTGCAAGGCCGGCAAGACAAGGCACTGCAAGTCGACACCCTGCTGCCAAAAGCGATCGAGCGCTTCCCTTGGGCTGGACACATGGGCCTGAAGATGCTCGACCAGGTCTGTCACGAGATCGATGC  <  NC_002947/1260846‑1260702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.