| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1473176 = | 52 (0.960) | 3 (0.060) | 3/248 | NT | 5.7% | coding (1045/1317 nt) | algD | GDP‑mannose 6‑dehydrogenase |
| ? | NC_002947 | 1473220 = | 50 (0.970) | coding (1001/1317 nt) | algD | GDP‑mannose 6‑dehydrogenase | |||||
GAATCGCAGGTGCAGAACGCCTTCGAGCTGATCGAAGCCCACGACAAGCGCAAGGTCGCCCTGCTGGGCCTGAGCTTCAAGGCCGGCACCGACGACCTGCGCGAAAGCCCGCTGGTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTACCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1473329‑1473176‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accagcGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGCGATTCGTTGCTGCGCATCAGCGAGTCGAGCAGCGGTGCACGGA > NC_002947/1473220‑1473367 GAATCGCAGGTGCAGAACGCCTTCGAGCTGATCGAAGCCCACGACAAGCGCAAGGTCGCCCTGCTGGGCCTGAGCTTCAAGGCCGGCACCGACGACCTGCGCGAAAGCCCGCTGGTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTA < 5:31884/149‑1 AATCGCAGGTGCAGAACGCCTTCGAGCTGATCGAAGCCCACGACAAGCGCAAGGTCGCCCTGCTGGGCCTGAGCTTCAAGGCCGGCACCGACGACCTGCGCGAAAGCCCGCTGGTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTAC < 1:320886/149‑1 AATCGCAGGTGCAGAACGCCTTCGAGCTGATCGAAGCCCACGACAAGCGCAAGGTCGCCCTGCTGGGCCTGAGCTTCAAGGCCGGCACCGACGACCTGCGCGAAAGCCCGCTGGTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTAC < 2:99323/149‑1 CCGCTGGTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCT > 7:53505/1‑149 GTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAG > 3:133268/1‑123 GTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAG < 4:133268/123‑1 ACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGCGATTCGTTGCTGCGCATCAGCGAGTCGAGCAGCGGTG > 6:62089/1‑148 AGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGCGATTCGTTGCTGCGCATCAGCGAGTCGAGCAGCGGTGCACG < 3:82295/149‑1 CGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGCGATTCGTTGCTGCGCATCAGCGAGTCGAGCAGCGGTGCACGGA > 7:174794/1‑149 CGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTAGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGCGATTCGTTGCTGCGCATCAGCGAGTCGAGCAGCGGTGCACGGA > 8:322551/1‑149 GAATCGCAGGTGCAGAACGCCTTCGAGCTGATCGAAGCCCACGACAAGCGCAAGGTCGCCCTGCTGGGCCTGAGCTTCAAGGCCGGCACCGACGACCTGCGCGAAAGCCCGCTGGTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTACCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1473329‑1473176‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accagcGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGCGATTCGTTGCTGCGCATCAGCGAGTCGAGCAGCGGTGCACGGA > NC_002947/1473220‑1473367 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |