| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1538420 = | 67 (1.240) | 4 (0.080) | 4/250 | NT | 6.2% | coding (118/567 nt) | pduO | ATP:cob(I)alamin adenosyltransferase |
| ? | NC_002947 | 1538452 = | 57 (1.100) | coding (86/567 nt) | pduO | ATP:cob(I)alamin adenosyltransferase | |||||
GGCAGCGGCGGTGCCGGCCAGAACGGAGCAATGACATGGGCTACCGCCTTTCGAAGATCTATACCCGCACCGGCGACAAAGGCGAAACCGGCCTGGGCGACGGCCGTCGAGTGCCCAAGGACCACCCGCGGATCGAAGCGATTGGCGAGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1538572‑1538420‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggTCCTTGGGCACTCGACGGCCGTCGCCCAGGCCGGTTTCGCCTTTGTCGCCGGTGCGGGTATAGATCTTCGAAAGGCGGTAGCCCATGTCAT‑TGCTCCGTTCTGGCCGGCACCGCCGCTGCCGGCTGGGTGAGGGGCAGGCGTAG > NC_002947/1538452‑1538595 GGCAGCGGCGGTGCCGGCCAGAACGGAGCAATGACATGGGCTACCGCCTTTCGAAGATCTATACCCGCACCGGCGACAAAGGCGAAACCGGCCTGGGCGACGGCCGTCGAGTGCCCAAGGACCACCCGCGGATCGAAGCGATTGGCGAG > 7:263566/1‑149 CAGCGGCGGTGCCGGCCAGAACGGAGCAATGACATGGGCTACCGCCTTTCGAAGATCTATACCCGCACCGGCGACAAAGGCGAAACCGGCCTGGGCGACGGCCGTCGAGTGCCCAAGGACCACCCGCGGATCGAAGCGATTGGCGAGGT < 1:182467/149‑1 AGGACCACCCGCGGATCGAAGCGATTGGCGAGGTGGTCCTTGGGCACTCGACGGCCGTCGCCCAGGCCGGTTTCGCCTTTGTCGCCGGTGCGGGTATAGATCTTCGAAAGGCGGTAGCCCATGTCAT‑TGCTCCGTTCTGGCCGGCACCG > 8:129290/1‑149 ACCACCCGCGGATCGAAGCGATTGGCGAGGTGGTCCTTGGGCACTCGACGGCCGTCGCCCAGGCCGGTTTCGCCTTTGTCGCCGGTGCGGGTATAGATCTTCGAAAGGCGGTAGCCCATGTCAT‑TGCTCCGTTCTGGCCGGCACCGCCG < 7:129290/149‑1 ACCACCCGCGGATCGAAGCGATTGGCGAGGTGGTCCTTGGGCACTCGACGGCCGTCGCCCAGGCCGGTTTCGCCTTTGTCGCCGGTGCGGGTATAGATCTTCGAAAGGCGGTAGCCCATG < 1:201768/120‑1 ACCACCCGCGGATCGAAGCGATTGGCGAGGTGGTCCTTGGGCACTCGACGGCCGTCGCCCAGGCCGGTTTCGCCTTTGTCGCCGGTGCGGGTATAGATCTTCGAAAGGCGGTAGCCCATG > 2:201768/1‑120 gaGGTCCTTGGGCACTCGACGGCCGTCGCCCAGGCCGGTTTCGCCTTTGTCGCCGGTGCGGGTATAGATCTTCGAAAGGCGGTAGCCCATGTCAT‑TGCTCCG > 4:256213/3‑102 GTGGTCCTTGGGCACTCGACGGCCGTCGCCCAGGCCGGTTTCGCCTTTGTCGCCGGTGCGGGTATAGATCTTCGAAAGGCGGTAGCCCATGTCATCTGCTCCGTTCTGGCCGGCACCGCCGCTGCCGGCTGGGTGAGGGGCAGGCGTAG < 1:262938/149‑1 GTGGTCCTTGGGCACTCGACGGCCGTCGCCCAGGCCGGTTTCGCCTTTGTCGCCGGTGCGGGTATAGATCTTCGAAAGGCGGTAGCCCATGTCAT‑TGCTCCG < 3:256213/102‑1 GGCAGCGGCGGTGCCGGCCAGAACGGAGCAATGACATGGGCTACCGCCTTTCGAAGATCTATACCCGCACCGGCGACAAAGGCGAAACCGGCCTGGGCGACGGCCGTCGAGTGCCCAAGGACCACCCGCGGATCGAAGCGATTGGCGAGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1538572‑1538420‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggTCCTTGGGCACTCGACGGCCGTCGCCCAGGCCGGTTTCGCCTTTGTCGCCGGTGCGGGTATAGATCTTCGAAAGGCGGTAGCCCATGTCAT‑TGCTCCGTTCTGGCCGGCACCGCCGCTGCCGGCTGGGTGAGGGGCAGGCGTAG > NC_002947/1538452‑1538595 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |