| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1541575 = | 59 (1.090) | 5 (0.100) | 5/242 | NT | 8.2% | intergenic (‑51/‑50) | panE/PP_1352 | 2‑dehydropantoate 2‑reductase/hypothetical protein |
| ? | NC_002947 | 1541605 = | 57 (1.130) | intergenic (‑81/‑20) | panE/PP_1352 | 2‑dehydropantoate 2‑reductase/hypothetical protein | |||||
CCCTTGAGGTCGTAGCGGCGGTCCAGTTCCTTGATGGCGTTGTCGACCGCGTTCTGCACTTCGTGCTTGTCCAGTTCCGATACCACGTCGAACGAAGGCATGGTTGTTCTCCCAAAATAAAAGCGCGCTCAGGCTGAAGATGGAGCGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1541725‑1541575‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgcgctTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAAGGCACCTTCGAGTTCAAGGACA > NC_002947/1541605‑1541751 CCCTTGAGGTCGTAGCGGCGGTCCAGTTCCTTGATGGCGTTGTCGACCGCGTTCTGCACTTCGTGCTTGTCCAGTTCCGATACCACGTCGAACGAAGGCATGGTTGTTCTCCCAAAATAAAAGCGCGCTCAGGCTGAAGATGGAGCGCG < 5:233468/149‑1 CTTGAGGTCGTAGCGGCGGTCCAGTTCCTTGATGGCGTTGTCGACCGCGTTCTGCACTTCGTGCTTGTCCAGTTCCGATACCACGTCGAACGAAGGCATGGTTGTTCTCCCAAAATAAAAGCGCGCTCAGGCTGAAGATGGAGCGCGCT < 3:216113/149‑1 CGTTCTGCACTTCGTGCTTGTCCAGTTCCGATACCACGTCGAACGAAGGCATGGTTGTTCTCCCAAAATAAAAGCGCGCTCAGGCTGAAGATGGAGCGC < 8:70609/99‑1 CGTTCTGCACTTCGTGCTTGTCCAGTTCCGATACCACGTCGAACGAAGGCATGGTTGTTCTCCCAAAATAAAAGCGCGCTCAGGCTGAAGATGGAGCGC > 7:70609/1‑99 CCAAAATAAAAGCGCGCTCAGGCTGAAGATGGAGCGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTA > 1:137358/1‑149 AAAGCGCGCTCAGGCTGAAGATGGAGCGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTG > 3:50463/1‑130 AAAGCGCGCTCAGGCTGAAGATGGAGCGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTG < 4:50463/130‑1 AGCGCGCTCAGGCTGAAGATGGAGCGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGC < 2:234364/96‑1 AGCGCGCTCAGGCTGAAGATGGAGCGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGC > 1:234364/1‑96 GAGCGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAAGGCACCTTCGAGTT > 7:148843/1‑148 GCGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAAGGCACCTTCGAGTTCAA < 4:216113/149‑1 GCGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAAGGCACCTTCGAGTTCAA < 5:252467/149‑1 CGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAAGGCACCTTCGAGTTCAAG < 4:68351/149‑1 CGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAAGGCACCTTCGAGTTCAAG < 6:64029/149‑1 CGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAAGGCACCTTCGAGTTCAAG < 7:115120/149‑1 CGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAAGGCACCTTCGAGTTCAAGGA < 6:233468/149‑1 GCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAG < 5:11977/122‑1 GCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAG > 6:11977/1‑122 CTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAAGGCACCTTCGAGTTCAAGGACA < 6:36682/149‑1 CCCTTGAGGTCGTAGCGGCGGTCCAGTTCCTTGATGGCGTTGTCGACCGCGTTCTGCACTTCGTGCTTGTCCAGTTCCGATACCACGTCGAACGAAGGCATGGTTGTTCTCCCAAAATAAAAGCGCGCTCAGGCTGAAGATGGAGCGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1541725‑1541575‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgcgctTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAAGGCACCTTCGAGTTCAAGGACA > NC_002947/1541605‑1541751 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |