New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1799062 | 45 (0.830) | 3 (0.060) | 3/246 | NT | 6.3% | coding (985/1128 nt) | lpxB | lipid‑A‑disaccharide synthase |
? | NC_002947 | = 1799086 | 46 (0.900) | coding (1009/1128 nt) | lpxB | lipid‑A‑disaccharide synthase |
TACAAGCGGCCGATGGTAGTGGCGTACCGCCTGGCGCCCTTGACCTTCTGGATTCTCAAGCGTCTGGTGAAAAGCCCTTACGTGTCATTGCCGAACCTGCTGGCCCAGCGAGAGCTGGTGCCCGAGTTGCTGCAGGACGACGCTACCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1798912‑1799062 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accagcgGCGCCAGGGTGTTGGCCAGCGCTTCGCTGGTAGCGTCGTCCTGCAGCAACTCGGGCACCAGCTCTCGCTGGGCCAGCAGGTTCGGCAATGACACGTAAGGGCTTTTCACCAGACGCTTGAGAATCCAGAAGGTCAAGGGCGCCAGG < NC_002947/1799086‑1798941 TACAAGCGGCCGATGGTAGTGGCGTACCGCCTGGCGCCCTTGACCTTCTGGATTCTCAAGCGTCTGGTGAAAAGCCCTTACGTGTCATTGCCGAACCTGCTGGCCCAGCGAGAGCTGGTGCCCGAGTTGCTGCAGGACGACGCTACCAG > 7:90432/1‑149 AAGCGGCCGATGGTAGTGGCGTACCGCCTGGCGCCCTTGACCTTCTGGATTCTCAAGCGTCTGGTGAAAAGCCCTTACGTGTCATTGCCGAACCTGCTGGCCCAGCGAGAGCTGGTGCCCGAGTTGCTGCAGGACGACGCTACCAGCG > 4:51059/1‑148 GCGCCCTTGACCTTCTGGATTCTCAAGCGTCTGGTGAAAAGCCCTTACGTGTCATTGCCGAACCTGCTGGCCCAGCGAGAGCTGGTGCCCGAGTTGCTGCAGGACGACGCTACCAGCGGCGCCAGGGTGTTGGCCAGCGCTTCGCTGG < 3:84854/148‑1 CGCCCTTGACCTTCTGGATTCTCAAGCGTCTGGTGAAAAGCCCTTACGTGTCATTGCCGAACCTGCTGGCCCAGCGAGAGCTGGTGCCCGAGTTGCTGCAGGACGACGCTACCAGCGGCGCCAGGGTGTTGGCCAGCGCTTCGCTGGTA < 6:210945/149‑1 TTCTGGATTCTCAAGCGTCTGGTGAAAAGCCCTTACGTGTCATTGCCGAACCTGCTGGCCCAGCGAGAGCTGGTGCCCGAGTTGCTGCAGGACGACGCTACCAGCGGCGCCAGGGTGTTGGCCAGCGCTTCGCTG > 6:89492/1‑135 GCGGCGCCAGGGTGTTGGCCAGCGCTTCGCTGGTAGCGTCGTCCTGCAGCAACTCGGGCACCAGCTCTCGCTGGGCCAGCAGGTTCGGCAATGACACGTAAGGGCTTTTCACCAGACGCTTGAGAATCCAGAAGGTCAAGGGCGCCAGG < 5:33119/149‑1 GCGGCGCCAGGGTGTTGGCCAGCGCTTCGCTGGTAGCGTCGTCCTGCAGCAACTCGGGCACCAGCTCTCGCTGGGCCAGCAGGTTCGGCAATGACACGTAAGGGCTTTTCACCAGACGCTTGAGAATCCAGAAGGTCAAGGGCGCCAGG > 6:329263/1‑149 TACAAGCGGCCGATGGTAGTGGCGTACCGCCTGGCGCCCTTGACCTTCTGGATTCTCAAGCGTCTGGTGAAAAGCCCTTACGTGTCATTGCCGAACCTGCTGGCCCAGCGAGAGCTGGTGCCCGAGTTGCTGCAGGACGACGCTACCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1798912‑1799062 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accagcgGCGCCAGGGTGTTGGCCAGCGCTTCGCTGGTAGCGTCGTCCTGCAGCAACTCGGGCACCAGCTCTCGCTGGGCCAGCAGGTTCGGCAATGACACGTAAGGGCTTTTCACCAGACGCTTGAGAATCCAGAAGGTCAAGGGCGCCAGG < NC_002947/1799086‑1798941 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |