New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2075067	50 (0.920)	4 (0.080)	4/244	NT	7.6%	coding (312/1188 nt)	ygaY	transporter YgaY
	?	NC_002947	= 2075102	50 (0.990)					coding (277/1188 nt)	ygaY	transporter YgaY

CCATGAAGCCGGCAGCAGTACGCGCCAGCAGGATGCCCAGCAGCAGGCCGCTCATCAGTGTGCCGACCGCGCGCCCACGCTGATGGGGCTCACTCAGGGTCGCTGCCATCGGCACGAGGATCTGTGCCACCACCGAGAACAGCCCGGTCAGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2074913‑2075067 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagcgccTGTGCACCCAGCCTGCCCTGGCTGCTGCTCGGCACGGCGCTGACCGGGCTGTTCTCGGTGGTGGCACAGATCCTCGTGCCGATGGCAGCGACCCTGAGTGAGCCCCATCAGCGTGGGCGCGCGGTCGGCACACTGATGAGCGG  <  NC_002947/2075102‑2074960                                                                                                                                                                                                                                                                                                            CCATGAAGCCGGCAGCAGTACGCGCCAGCAGGATGCCCAGCAGCAGGCCGCTCATCAGTGTGCCGACCGCGCGCCCACGCTGATGGGGCTCACTCAGGGTCGCTGCCATCGGCACGAGGATCTGTGCCACCACCGAGAACAGCCCGGT                                                                                                                                                        >  1:285539/1‑148       AGCCGGCAGCAGTACGCGCCAGCAGGATGCCCAGCAGCAGGCCGCTCATCAGTGTGCCGACCGCGCGCCCACGCTGATGGGGCTCACTCAGGGTCGCTGCCATCGGCACGAGGATCTGTGCCACCACCGAGAACAGCCCGGTCAGCGCC                                                                                                                                                 <  5:15258/149‑1                      GCGCCAGCAGGATGCCCAGCAGCAGGCCGCTCATCAGTGTGCCGACCGCGCGCCCACGCTGATGGGGCTCACTCAGGGTCGCTGCCATCGGCACGAGGATCTGTGCCACCACCGAGAACAGCCCGGTCAGCGCCTGTGCACCCAGCCTG                                                                                                                                  >  5:146118/1‑149                                              GGCCGCTCATCAGTGTGCCGACCGCGCGCCCACGCTGATGGGGCTCACTCAGGGTCGCTGCCATCGGCACGAGGATCTGTGCCACCACCGAGAACAGCCCGGTCAGCGCCTGTGCACCCAGCCTGCCCTGGCTGCTGCTCGGCACGGCG                                                                                                          <  6:146118/149‑1                                                      ATCAGTGTGCCGACCGCGCGCCCACGCTGATGGGGCTCACTCAGGGTCGCTGCCATCGGCACGAGGATCTGTGCCACCACCGAGAACAGCCCGGTCAGCGCCTGTGCACCCAGCCTGCCCTGGCTGCTGCTCGGCACGGCGCTGACC                                                                                                    <  1:289903/147‑1                                                       TCAGTGTGCCGACCCCGCTCCCACGCTGATGGGGCTCACTCAGGGTCGCTGCCATCGGCACGAGGATCTGTTCCACCACCGAGAACATCCCGGTCAGCGCCTGTGCACCCAGCCTGCCCTGGCTGCTGCTCGGCACGGAGCTGACCGGG                                                                                                 <  8:30900/149‑1                                                                                                                                                    TCAGCGCCTGTGCACCCAGCCTGCCCTGGCTGCTGCTCGGCACGGCGCTGACCGGGCTGTTCTCGGTGGTGGCACAGATCCTCGTGCCGATGGCAGCGACCCTGAGTGAGCCCCATCAGCGTGGGCGCGCGGTCGGC                >  3:99944/1‑137                                                                                                                                                    TCAGAGCCTGTGCACCCAGCCTGCCCTGGCTGCTGCTCGGCACGGCGCTGACCGGGCTGTTCTCGGTGGTGGCACAGATCCTCGTGCCGATGGCAGCGACCCTGAGTGAGCCCCATCAGCGTGGGCGCGCGGTCGGC                <  4:99944/137‑1                                                                                                                                                     CAGCGCCTGTGCACCCAGCCTGCCCTGGCTGCTGCTCGGCACGGCGCTGACCGGGCTGTTCTCGGTGGTGGCACAGATCCTCGTGCCGATGGCAGCGACCCTGA                                                >  7:43080/1‑104                                                                                                                                                     CAGCGCCTGTGCACCCAGCCTGCCCTGGCTGCTGCTCGGCACGGCGCTGACCGGGCTGTTCTCGGTGGTGGCACAGATCCTCGTGCCGATGGCAGCGACCCTGA                                                <  8:43080/104‑1                                                                                                                                                      AGCGCCTGTGCACCCAGCCTGCCCTGGCTGCTGCTCGGCACGGCGCTGACCGGGCTGTTCTCGGTGGTGGCACAGATCCTCGTGCCGATGGCAGCGACCCTGAGTGAGCCCCATCAGCGTGGGCGCGCGGTCGGCACACTGATGAGCGG  <  2:94857/149‑1                                                                                                                                                                                                                                                                                                            CCATGAAGCCGGCAGCAGTACGCGCCAGCAGGATGCCCAGCAGCAGGCCGCTCATCAGTGTGCCGACCGCGCGCCCACGCTGATGGGGCTCACTCAGGGTCGCTGCCATCGGCACGAGGATCTGTGCCACCACCGAGAACAGCCCGGTCAGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2074913‑2075067 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagcgccTGTGCACCCAGCCTGCCCTGGCTGCTGCTCGGCACGGCGCTGACCGGGCTGTTCTCGGTGGTGGCACAGATCCTCGTGCCGATGGCAGCGACCCTGAGTGAGCCCCATCAGCGTGGGCGCGCGGTCGGCACACTGATGAGCGG  <  NC_002947/2075102‑2074960

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.