| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2323366 = | 54 (1.000) | 3 (0.060) | 3/240 | NT | 5.9% | coding (54/1329 nt) | PP_2043 | hypothetical protein |
| ? | NC_002947 | 2323427 = | 46 (0.920) | coding (115/1329 nt) | PP_2043 | hypothetical protein | |||||
GCCCAGGCGTTGCTGGGCTGTACTCAACCCACCTTGCCAGGCCGGTATGCGCCCGTCGGGGCTGGCAGCACGCTCGGCTCCCACCGGGGTCAGGTTGTCGGGCAGGCCGGCTGCTGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2323486‑2323366‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgccagcCCCGACGGGCGCATACCGGCCTGGCAAGGTGGGTTGAGTACAGCCCAGCAACGCCTGGGCGACAACGGCACGCCGCTGGACCCGTTTGCCGATGAGCAGCCTCTGTACCGGATCACGGCCGCCAACTACCGGCAGTACC > NC_002947/2323427‑2323565 GCCCAGGCGTTGCTGGGCTGTACTCAACCCACCTTGCCAGGCCGGTATGCGCCCGTCGGGGCTGGCAGCACGCTCGGCTCCCACCGGGGTCAGGTTGTCGGGCAGGCCGGCTGCT > 7:109977/1‑115GCCCAGGCGTTGCTGGGCTGTACTCAACCCACCTTGCCAGGCCGGTATGCGCCCGTCGGGGCTGGCAGCACGCTCGGCTCCCACCGGGGTCAGGTTGTCGGGCAGGCCGGCTGCT < 8:109977/115‑1 GCAGCACGCTCGGCTCCCACCGGGGTCAGGTTGTCGGGCAGGCCGGCTGCTGCCAGCCCCGACGGGCGCATACCGGCCTGGCAAGGTGGGTTGAGTACAGCCCAGCAACGCCTGGGCGACAACGGCACGCCGCTGGACCCGTTTGCCGA > 6:203761/1‑149 AGCACGCTCGGCTCCCACCGGGGTCAGGTTGTCGGGCAGGCCGGCTGCTGCCAGCCCCGACGGGCGCATACCGGCCTGGCAAGGTGGGTTGAGTACAGCCCAGAAACGCCTGGGCGACAACGGCACGCCGCTGGACCCGTTTGCCGAT > 6:33137/1‑148 CCACCGGGGTCAGGTTGTCGGGCAGGCCGGCTGCTGCCAGCCCCGACGGGCGCATACCGGCCTGGCAAGGTGGGTTGAGTACAGCCCAGCAACGCCTGGGCGACAACGGCACGCCGCTGGACCCGTTTGCCGATGAGCAGCCTCTGTA < 5:33137/148‑1 GCTGCCAGCCCCGACGGGCGCATACCGGCCTGGCAAGGTGGGTTGAGTACAGCCCAGCAACGCCTGGGCGACAACGGCACGCCGCTGGACCCGTTTGCCGATGAGCAGCCTCTGTACCGGATCACGGCCGCCAACTACCGGCAGTACC > 4:258250/1‑148 CTGCCAGCCCCGACGGGCGCATACCGGCCTGGCAAGGTGGGTTGAGTACAGCCCAGCAACGCCTGGGCGACAACGGCACGCCGCTGGACCCGTTTGCCGATGAGCAGCCTCTGTACCGGATCACGGCCGCCAACTACCGGCAGTACC > 7:122686/1‑147 CCAGCCCCGACGGGCGCATACCGGCCTGGCAAGGTGGGTTGAGTACAGCCCAGCAACGCCTGGGCGACAACGGCACGCCGCTGGACCCGTTTGCCGATGAGCAGCCTCTGTACCGGATCACGG < 3:171054/123‑1 CCAGCCCCGACGGGCGCATACCGGCCTGGCAAGGTGGGTTGAGTACAGCCCAGCAACGCCTGGGCGACAACGGCACGCCGCTGGACCCGTTTGCCGATGAGCAGCCTCTGTACCGGATCACGG > 4:171054/1‑123 GCCCAGGCGTTGCTGGGCTGTACTCAACCCACCTTGCCAGGCCGGTATGCGCCCGTCGGGGCTGGCAGCACGCTCGGCTCCCACCGGGGTCAGGTTGTCGGGCAGGCCGGCTGCTGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2323486‑2323366‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgccagcCCCGACGGGCGCATACCGGCCTGGCAAGGTGGGTTGAGTACAGCCCAGCAACGCCTGGGCGACAACGGCACGCCGCTGGACCCGTTTGCCGATGAGCAGCCTCTGTACCGGATCACGGCCGCCAACTACCGGCAGTACC > NC_002947/2323427‑2323565 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |