New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3552652	73 (1.350)	4 (0.080)	4/242	NT	5.4%	coding (309/978 nt)	PP_3137	group 2 family glycosyl transferase
	?	NC_002947	= 3552675	73 (1.450)					coding (332/978 nt)	PP_3137	group 2 family glycosyl transferase

GCAGTACTGGCGCTGGACATGAGTATCCCGTTCACCGCCGCACGCGCCCGCAATGAAGGTTTTGCCGCCTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3552500‑3552652 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacggcgGGGTGCTGCTCAAGAAAAGCCTGCGCCGTGGCCAGCCAGCTGGCATTCACCTCGCAGTCGCCATCGACGAACTGTACCAGCTGCATCGATGGCAACAGGCGCTGCAAGGCGGCAAAACCTTCATTGCGGGCGCGTGCGGCGGTGAACG  <  NC_002947/3552675‑3552528                                                                                                                                                                                                                                                                                                               GCAGTACTGGCGCTGGACATGAGTATCCCGTTCACCGCCGCACGCGCCCGCAATGAAGGTTTTGCCGCCTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCAC                                                                                                                                                          >  6:184780/1‑149   AGTACTGGCGCTGGACATGAGTATCCCGTTCACCGCCGCACGCGCCCGCAATGAAGGTTTTGCCGCCTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGG                                                                                                                                                        >  4:217517/1‑149                                     GCCGCACGCGCCCGCAATGAAGGTTTTGCCGCCTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGGGGTGCTGCTCAAGAAAAGCCTGCGCCGTGGC                                                                                                                      <  5:251224/149‑1                                       CGCACGCGCCCGCAATGAAGGTTTTGCCGCCTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGGGGTGCTGCTCAAGAAAAGCCTGCGCCGTGGCCA                                                                                                                    <  8:265300/149‑1                                                       GAAGGTTTTGCCGCCTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGGGGTGCTGCTCAAGAAAAGCCTGCGCCGTG                                                                                                                        >  3:288574/1‑129                                                       GAAGGTTTTGCCGCCTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGGGGTGCTGCTCAAGAAAAGCCTGCGCCGTG                                                                                                                        <  4:288574/129‑1                                                                                                                                                  CCACGGCGGGGTGCTGCTCAAGAAAAGCCTGCGCCGTGGCCAGCCAGCTGGCATTCACCTCGCAGTCGCCATCGACGAACTGTACCAGCTGCATCGATGGCAACAGGCGCTGCAAGGCGGCAAAACCTTCATTGCGGGCGCGTGCGGCG         >  2:168032/1‑149                                                                                                                                                      GGCGGGGTGCTGCTCAAGAAAAGCCTGCGCCGTGGCCAGCCAGCTGGCATTCACCTCGCAGTCGCCATCGACGAACTGTACCAGCTGCATCGATGGCAAC                                                      >  7:248353/1‑100                                                                                                                                                      GGCGGGGTGCTGCTCAAGAAAAGCCTGCGCCGTGGCCAGCCAGCTGGCATTCACCTCGCAGTCGCCATCGACGAACTGTACCAGCTGCATCGATGGCAAC                                                      <  8:248353/100‑1                                                                                                                                                         GGGGTGCTGCTCAAGAAAAGCCTGCGCCGTGGCCAGCCAGCTGGCATTCACCTCGCAGTCGCCATCGACGAACTGTACCAGCTGCATCGATGGCAACAGGCGCTGCAAGGCGGCAAAACCTTCATTGCGGGCGCGTGCGGCGGTGAACG  <  3:271288/149‑1                                                                                                                                                                                                                                                                                                               GCAGTACTGGCGCTGGACATGAGTATCCCGTTCACCGCCGCACGCGCCCGCAATGAAGGTTTTGCCGCCTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3552500‑3552652 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacggcgGGGTGCTGCTCAAGAAAAGCCTGCGCCGTGGCCAGCCAGCTGGCATTCACCTCGCAGTCGCCATCGACGAACTGTACCAGCTGCATCGATGGCAACAGGCGCTGCAAGGCGGCAAAACCTTCATTGCGGGCGCGTGCGGCGGTGAACG  <  NC_002947/3552675‑3552528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.