New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3692123	51 (0.940)	3 (0.060)	3/250	NT	5.7%	coding (463/756 nt)	PP_3258	hypothetical protein
	?	NC_002947	= 3692183	51 (0.980)					coding (403/756 nt)	PP_3258	hypothetical protein

AGCTGCACGCGGTGCGCACGGGGCCATGGCAGGCGCGGGTCGTCAGGCTCAGCCCAGTGCCAGGCCCAGACCGGTACCTCAGCCAAGTGCACCCCACGGGTTGCCGCCGCCTGCGCAGCGGCGCGGCCGACGGCCTCGTGATCGCAATGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3691972‑3692123 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaccCGTCACCTCACCCAGTTACTGCGCGCCGATGACCTGCTGATGGCCACCTGGCGCAGTGACGGTCATTGCGATCACGAGGCCGTCGGCCGCGCCGCTGCGCAGGCGGCGGCAACCCGTGGGGTGCACTTGGCTGAGGTACCGGTCTGGG  <  NC_002947/3692183‑3692036                                                                                                                                                                                                                                                                                                              AGCTGCACGCGGTGCGCACGGGGCCATGGCAGGCGCGGGTCGTCAGGCTCAGCCCAGTGCCAGGCCCAGACCGGTACCTCAGCCAAGTGCACCCCCCGGGTTGCCGCCGCCTGCGCAGCGGCGCGGCCGACGGCCTCGTGATCGCAATG                                                                                                                                                         <  6:262290/149‑1                                                                       CCGGTACCTCAGCCAAGTGCACCCCACGGGTTGCCGCCGCCTGCGCAGCGGCGCGGCCGACGGCCTCGTGATCGCAATGACCCGTCACCTCACCCAGTTACTGCGCGCCGATGACCTGCTGATGGCCACCTGGCGCAGTGACGGTCATT                                                                                   <  7:34777/149‑1                                                                                             CCCACGGGTTGCCGCCGCCTGCGCAGCGGCGCGGCCGACGGCCTCGTGATCGCAATGACCCGTCACCTCACCCAGTTACTGCGCGCCGATGACCTGCTGATGGCCACCTGGCGCAGTGACGG                                                                                        <  7:290014/122‑1                                                                                             CCCACGGGTTGCCGCCGCCTGCGCAGCGGCGCGGCCGACGGCCTCGTGATCGCAATGACCCGTCACCTCACCCAGTTACTGCGCGCCGATGACCTGCTGATGGCCACCTGGCGCAGTGACGG                                                                                        >  8:290014/1‑122                                                                                                                                                     GACCCGTCACCTCACCCAGTTACTGCGCGCCGATGACCTGCTGATGGCCACCTGGCGCAGTGACGGTCATTGCGATCACGAGGCCGTCGGCCGCGCCGCTGCGCAGGCGGCGGCAACCCGTGGGGTGCACTTGGCT                  >  7:77325/1‑136                                                                                                                                                     GACCCGTCACCTCACCCAGTTACTGCGCGCCGATGACCTGCTGATGGCCACCTGGCGCAGTGACGGTCATTGCGATCACGAGGCCGTCGGCCGCGCCGCTGCGCAGGCGGCGGCAACCCGTGGGGTGCACTTGGCT                  <  8:77325/136‑1                                                                                                                                                        CCGTCACCTCACCCAGTTACTGCGCGCCGATGACCTGCTGATGGCCACCTGGCGCAGTGACGGTCATTGCGATCACGAGGCCGTCGGCCGCGCCGCTGCGCAGGCGGCGGCAACCCGTGGGGTGCACTTGGCTGAGGTACCGGTCTGGG  >  1:246400/1‑149                                                                                                                                                                                                                                                                                                              AGCTGCACGCGGTGCGCACGGGGCCATGGCAGGCGCGGGTCGTCAGGCTCAGCCCAGTGCCAGGCCCAGACCGGTACCTCAGCCAAGTGCACCCCACGGGTTGCCGCCGCCTGCGCAGCGGCGCGGCCGACGGCCTCGTGATCGCAATGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3691972‑3692123 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaccCGTCACCTCACCCAGTTACTGCGCGCCGATGACCTGCTGATGGCCACCTGGCGCAGTGACGGTCATTGCGATCACGAGGCCGTCGGCCGCGCCGCTGCGCAGGCGGCGGCAACCCGTGGGGTGCACTTGGCTGAGGTACCGGTCTGGG  <  NC_002947/3692183‑3692036

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.