| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3755008 = | 61 (1.130) | 3 (0.060) | 3/246 | NT | 5.1% | coding (449/2202 nt) | PP_3319 | GGDEF domain‑containing sensory box protein |
| ? | NC_002947 | 3755055 = | 53 (1.040) | coding (496/2202 nt) | PP_3319 | GGDEF domain‑containing sensory box protein | |||||
AGGGCGAAAACCGGGTTGGGGTTGTAGGTAAACAATGAGCGAAACCGTTGTTCGCTTTCCTCCAGACGTTGGCCGTCACGCTCATGCCGGATCGCAATGGCAGCCAGTTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3755161‑3755008‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcaaCTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCATTGTTTACCTACAACCCCAACCCGGTTTTCGCCCTTGACAGGGCGGGCAACATCCAGAGTGTGAACCCAGCTGGC > NC_002947/3755055‑3755201 AGGGCGAAAACCGGGTTGGGGTTGTAGGTAAACAATGAGCGAAACCGTTGTTCGCTTTCCTCCAGACGTTGGCCGTCACGCTCATGCCGGATCGCAATGGCAGCCAGTTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGG > 4:213203/1‑149 GGGCGAAAACCGGGTTGGGGTTGTAGGTAAACAATGAGCGAAACCGTTGTTCGCTTTCCTCCAGACGTTGGCCGTCACGCTCATGCCGGATCGCAATGGCAGCCAGTTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGC > 1:74602/1‑149 GGGCGAAAACCGGGTTGGGGTTGTAGGTAAACAATGAGCGAAACCGTTGTTCGCTTTCCTCCAGACGTTGGCCGTCACGCTCATGCCGGATCGCAATGGCAGCCAGTTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGC < 4:310783/149‑1 CAGTTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCATTGTTTACCTACAACCCCAACCCGGTT > 1:151600/1‑149 GTTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCATTGTTTACCTACAACCCCAACCCGGTTTT > 8:145104/1‑149 TTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCATTGTTTACCTACAACCCCAACCCGGTTTTC < 2:151600/149‑1 GGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCATTGTTTACCTACAACCCCAACCCGGTTTTCGCCCTTGACAGGGCGGGCAACATCCAGAGTGTGAACCCAG > 8:277486/1‑149 AACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCATTGTTTACCTACAACCCCAACCCGGTTTTCGCCCTTGACAGGGCGGGCAACATCCAGAGTGTGAACCCAGCTGGC > 6:17516/1‑149 AGGGCGAAAACCGGGTTGGGGTTGTAGGTAAACAATGAGCGAAACCGTTGTTCGCTTTCCTCCAGACGTTGGCCGTCACGCTCATGCCGGATCGCAATGGCAGCCAGTTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3755161‑3755008‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcaaCTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCATTGTTTACCTACAACCCCAACCCGGTTTTCGCCCTTGACAGGGCGGGCAACATCCAGAGTGTGAACCCAGCTGGC > NC_002947/3755055‑3755201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |