| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3836707 = | 58 (1.070) | 3 (0.060) | 3/248 | NT | 5.4% | coding (302/2673 nt) | PP_3388 | hypothetical protein |
| ? | NC_002947 | 3836787 = | 49 (0.950) | coding (382/2673 nt) | PP_3388 | hypothetical protein | |||||
AGTTCCTGGATGTCGTCGAGGTCGTAGAGGGTGATGGTCCAGCCGAAGCTGCGGATGATGTCATCCAGATTGCCAGTGAGGGGGGCGGGCTCCCACGGTGCGTCGGCGCTGATGTACAGCAGCGAACCATTGGGTGCCACGCGGTACTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3836857‑3836707‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actggcAATCTGGATGACATCATCCGCAGCTTCGGCTGGACCATCACCCTCTACGACCTCGACGACATCCAGGAACTGCGTCCGCTTTTTAGCCCTTCCCCACTCACTCCGCGCCTGCTCGACAACTACCGCCTCCTCGAAGACGAATACCGC > NC_002947/3836787‑3836933 AGTTCCTGGATGTCGTCGAGGTCGTAGAGGGTGATGGTCCAGCCGAAGCTGCGGATGATGTCATCCAGATTGCCAGTGAGGGGGGCGGGCTCCCACGGTGCGTCGGCGCTGATGTACAGCAGCGAACCATTGGGTGCCACGCGGTACTG > 2:287068/1‑149 TTCCTGGATGTCGTCGAGGTCGTAGAGGGTGATGGTCCAGCCGAAGCTGCGGATGATGTCATCCAGATTGCCAGTGAGGGGGGCGGGCTCCCACGGTGCGTCGGCGCTGATGTACAGCAGCGAACCATTGGGTGCCACGCGGTACTGGC > 4:332443/1‑149 CAGATTGCCAGTGAGGGGGGCGGGCTCCCACGGTGCGTCGGCGCTGATGTACAGCAGCGAACCATTGGGTGCCACGCGGTACTGGCAATCTGGATGACATCATCCGCAGCTTCGGCTGGACCATCACCCTCTACGACCTCGACGACATC > 7:317945/1‑149 GATTGCCAGTGAGGGGGGCGGGCTCCCACGGTGCGTCGGCGCTGATGTACAGCAGCGAACCATTGGGTGCCACGCGGTACTGGCAATCTGGATGACATCATCCGCAGCTTCGGCTGGACCATCACCCTCTACGACCTCGACGACATCC > 4:61311/1‑148 GGCTCCCACGGTGCGTCGGCGCTGATGTACAGCAGCGAACCATTGGGTGCCACGCGGTACTGGCAATCTGGATGACATCATCCGCAGCTTCGGCTGGACCATCACCCTCTACGACCTCGACGACATCCAGGAACTGCGTCCGCTTTTTA < 8:317945/149‑1 ACTGGCAATCTGGATGACATCATCCGCAGCTTCGGCTGGACCATCACCCTCTACGACCTCGACGACATCCAGGAACTGCGTCCGCTTTTTAGCCCTTCCCCACTCACTCCGCGCCTGCTCGACAACTACCGCCTCCTCGAAGACGAATA < 8:43764/149‑1 TGGCAATCTGGATGACATCATCCGCAGCTTCGGCTGGACCATCACCCTCTACGACCTCGACGACATCCAGGAACTGCGTCCGCTTTTTAGCCCTTCCCCACTCACTCCGCGCCTGCTCGACAACTACCGCCTCCTCGAAGACGAATACC < 3:61311/149‑1 GCAATCTGGATGACATCATCCGCAGCTTCGGCTGGACCATCACCCTCTACGACCTCGACGACATCCAGGAACTGCGTCCGCTTTTTAGCCCTTCCCCACTCACTCCGCTCCTGCTCGACAACTACCGCCTCCTCGAAGACGAATACCGC < 1:93776/149‑1 GCAATCTGGATGACATCATCCGCAGCTTCGGCTGGACCATCACCCTCTACGACCTCGACGACATCCAGGAACTGCGTCCGCTTTTTAGCCCTTCCCCACTCACTCCGCGCCTGCTCGACAACTACCGCCTCCTCGAAGACGAATACC < 5:132115/147‑1 AGTTCCTGGATGTCGTCGAGGTCGTAGAGGGTGATGGTCCAGCCGAAGCTGCGGATGATGTCATCCAGATTGCCAGTGAGGGGGGCGGGCTCCCACGGTGCGTCGGCGCTGATGTACAGCAGCGAACCATTGGGTGCCACGCGGTACTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3836857‑3836707‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actggcAATCTGGATGACATCATCCGCAGCTTCGGCTGGACCATCACCCTCTACGACCTCGACGACATCCAGGAACTGCGTCCGCTTTTTAGCCCTTCCCCACTCACTCCGCGCCTGCTCGACAACTACCGCCTCCTCGAAGACGAATACCGC > NC_002947/3836787‑3836933 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |