New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 388239258 (1.070)3 (0.060) 3/252 NT 5.2% coding (1051/1416 nt) oprN multidrug RND transporter outer membrane protein OprN
?NC_002947 = 3882426 54 (1.030)coding (1085/1416 nt) oprN multidrug RND transporter outer membrane protein OprN

CGTTGGCGTGGCCACCGCCGACCTGTTCCCGCGCGTCAGCCTCAGTGGCTTCCTCGGCTTTACCGCCGCCCGCGGCTCGCAGATCGGCTCTTCGGCGGCCAACGCCTGGGCACTGGGCCCGAGCATTACCTGGGCGGCCTTCGACCTGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3882241‑3882392
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaTCGGCCTTGGCGCCGCGCAGGCGGGCCCGCACGCTGCCCAGGTCGAAGGCCGCCCAGGTAATGCTCGGGCCCAGTGCCCAGGCGTTGGCCGCCGAAGAGCCGATCTGCGAGCCGCGGGCGGCGGTAAAGCCGAGGAAGCCACTGAGGC  <  NC_002947/3882426‑3882279
                                                                                                                                                                                                                                                                                                             
CGTTGGCGTGGCCACCGCCGACCTGTTCCCGCGCGTCAGCCTCAGTGGCTTCCTCGGCTTTACCGCCGCCCGCGGCTCGCAGATCGGCTCTTCGGCGGCCAACGCCTGGGCACTGGGCCCGAGCATTACCTGGGCGGCCTTCGACCTGG                                                                                                                                                         <  2:199266/149‑1
     GCGTGGCCACCGCCGACCTGTTCCCGCGCGTCAGCCTCAGTGGCTTCCTCGGCTTTACCGCCGCCCGCGGCTCGCAGATCGGCTCTTCGGCGGCCAACGCCTGGGCACTGGGCCCGAGCATTACCTGGGCGGCCTTCGACCTGGGtagc                                                                                                                                                    <  7:207740/149‑5
                                             TGGCTTCCTCGGCTTTACCGCCGCCCGCGGCTCGCAGATCGGCTCTTCGGCGGCCAACGCCTGGGCACTGGGCCCGAGCATTACCTGGGCGGCCTTCCGACCTGGGCATCGGCCTTGGCGCCGCGCAGGCGGGCCCGCACGCTGCCCAG                                                                                                             <  1:85788/149‑1
                                                          TTTACCGCCGCCCGCGGCTCGCAGATCGGCTCTTCGGCGGCCAACGCCTGGGCACTGGGCCCGAGCATTACCTGGGCGGCCTTCGACCTGGGCATCGGCCTTGGCGCCGCGCAGGCGGGCCCGCACGCTGCCCA                                                                                                              >  3:21926/1‑134
                                                          TTTACCGCCGCCCGCGGCTCGCAGATCGGCTCTTCGGCGGCCAACGCCTGGGCACTGGGCCCGAGCATTACCTGGGCGGCCTTCGACCTGGGCATCGGCCTTGGCGCCGCGCAGGCGGGCCCGCACGCTGCCCA                                                                                                              <  4:21926/134‑1
                                                                                                                                                       CATCGGCCTTGGCGCCGCGCAGGCGGGCCCGCACGCTGCCCAGGTCGAAGGCCGCCCAGGTAATGCTCGGGCCCAGTGCCCAGGCGTTGGCCGCCGAAGAGCCGATCTGCGAGCCGCGGGCGGCGGTAAAGCCGAGGAAGCCACTGAtt   <  7:220532/149‑3
                                                                                                                                                        ATCGGCCTTGGCGCCGCGCAGGCGGGCCCGCACGCTGCCCAGGTCGAAGGCCGCCCAGGTAATGCTCGGGCCCAGTGCCCAGGCGTTGGCCGCCGAAGAGCCGATCTGCGAGCCGCGGGCGGCGGTAAAGCCGAGGAAGCCACTGAGGC  <  1:159503/149‑1
                                                                                                                                                                                                                                                                                                             
CGTTGGCGTGGCCACCGCCGACCTGTTCCCGCGCGTCAGCCTCAGTGGCTTCCTCGGCTTTACCGCCGCCCGCGGCTCGCAGATCGGCTCTTCGGCGGCCAACGCCTGGGCACTGGGCCCGAGCATTACCTGGGCGGCCTTCGACCTGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3882241‑3882392
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaTCGGCCTTGGCGCCGCGCAGGCGGGCCCGCACGCTGCCCAGGTCGAAGGCCGCCCAGGTAATGCTCGGGCCCAGTGCCCAGGCGTTGGCCGCCGAAGAGCCGATCTGCGAGCCGCGGGCGGCGGTAAAGCCGAGGAAGCCACTGAGGC  <  NC_002947/3882426‑3882279

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.