New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3882392 | 58 (1.070) | 3 (0.060) | 3/252 | NT | 5.2% | coding (1051/1416 nt) | oprN | multidrug RND transporter outer membrane protein OprN |
? | NC_002947 | = 3882426 | 54 (1.030) | coding (1085/1416 nt) | oprN | multidrug RND transporter outer membrane protein OprN |
CGTTGGCGTGGCCACCGCCGACCTGTTCCCGCGCGTCAGCCTCAGTGGCTTCCTCGGCTTTACCGCCGCCCGCGGCTCGCAGATCGGCTCTTCGGCGGCCAACGCCTGGGCACTGGGCCCGAGCATTACCTGGGCGGCCTT‑CGACCTGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3882241‑3882392 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaTCGGCCTTGGCGCCGCGCAGGCGGGCCCGCACGCTGCCCAGGTCGAAGGCCGCCCAGGTAATGCTCGGGCCCAGTGCCCAGGCGTTGGCCGCCGAAGAGCCGATCTGCGAGCCGCGGGCGGCGGTAAAGCCGAGGAAGCCACTGAGGC < NC_002947/3882426‑3882279 CGTTGGCGTGGCCACCGCCGACCTGTTCCCGCGCGTCAGCCTCAGTGGCTTCCTCGGCTTTACCGCCGCCCGCGGCTCGCAGATCGGCTCTTCGGCGGCCAACGCCTGGGCACTGGGCCCGAGCATTACCTGGGCGGCCTT‑CGACCTGG < 2:199266/149‑1 GCGTGGCCACCGCCGACCTGTTCCCGCGCGTCAGCCTCAGTGGCTTCCTCGGCTTTACCGCCGCCCGCGGCTCGCAGATCGGCTCTTCGGCGGCCAACGCCTGGGCACTGGGCCCGAGCATTACCTGGGCGGCCTT‑CGACCTGGGtagc < 7:207740/149‑5 TGGCTTCCTCGGCTTTACCGCCGCCCGCGGCTCGCAGATCGGCTCTTCGGCGGCCAACGCCTGGGCACTGGGCCCGAGCATTACCTGGGCGGCCTTCCGACCTGGGCATCGGCCTTGGCGCCGCGCAGGCGGGCCCGCACGCTGCCCAG < 1:85788/149‑1 TTTACCGCCGCCCGCGGCTCGCAGATCGGCTCTTCGGCGGCCAACGCCTGGGCACTGGGCCCGAGCATTACCTGGGCGGCCTT‑CGACCTGGGCATCGGCCTTGGCGCCGCGCAGGCGGGCCCGCACGCTGCCCA > 3:21926/1‑134 TTTACCGCCGCCCGCGGCTCGCAGATCGGCTCTTCGGCGGCCAACGCCTGGGCACTGGGCCCGAGCATTACCTGGGCGGCCTT‑CGACCTGGGCATCGGCCTTGGCGCCGCGCAGGCGGGCCCGCACGCTGCCCA < 4:21926/134‑1 CATCGGCCTTGGCGCCGCGCAGGCGGGCCCGCACGCTGCCCAGGTCGAAGGCCGCCCAGGTAATGCTCGGGCCCAGTGCCCAGGCGTTGGCCGCCGAAGAGCCGATCTGCGAGCCGCGGGCGGCGGTAAAGCCGAGGAAGCCACTGAtt < 7:220532/149‑3 ATCGGCCTTGGCGCCGCGCAGGCGGGCCCGCACGCTGCCCAGGTCGAAGGCCGCCCAGGTAATGCTCGGGCCCAGTGCCCAGGCGTTGGCCGCCGAAGAGCCGATCTGCGAGCCGCGGGCGGCGGTAAAGCCGAGGAAGCCACTGAGGC < 1:159503/149‑1 CGTTGGCGTGGCCACCGCCGACCTGTTCCCGCGCGTCAGCCTCAGTGGCTTCCTCGGCTTTACCGCCGCCCGCGGCTCGCAGATCGGCTCTTCGGCGGCCAACGCCTGGGCACTGGGCCCGAGCATTACCTGGGCGGCCTT‑CGACCTGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3882241‑3882392 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaTCGGCCTTGGCGCCGCGCAGGCGGGCCCGCACGCTGCCCAGGTCGAAGGCCGCCCAGGTAATGCTCGGGCCCAGTGCCCAGGCGTTGGCCGCCGAAGAGCCGATCTGCGAGCCGCGGGCGGCGGTAAAGCCGAGGAAGCCACTGAGGC < NC_002947/3882426‑3882279 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |