| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3976609 = | 52 (0.960) | 4 (0.080) | 4/246 | NT | 7.8% | coding (259/1014 nt) | PP_3506 | magnesium chelatase subunit ChII |
| ? | NC_002947 | 3976684 = | 45 (0.880) | coding (184/1014 nt) | PP_3506 | magnesium chelatase subunit ChII | |||||
ATCGAAGGGCCGCGTGGCATGGCCAAGAGCACCCTGGCCCGTGGCCTGGCCGACCTGCTTGGCGAAGGCCCGTTCGTCACCTTGCCATTGGGCGCCAGTGAAGAGCGGCTGGTCGGCACCCTCGACCTGGATGCCGCGCTGGGGCAGGGCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3976762‑3976609‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaaggTGACGAACGGGCCTTCGCCAAGCAGGTCGGCCAGGCCACGGGCCAGGGTGCTCTTGGCCATGCCACGCGGCCCTTCGATCAACACACCACCGATCCTGGGGTCGATAGCGGTCAGG > NC_002947/3976684‑3976799 ATCGAAGGGCCGCGTGGGATGGCCAAGAGCACCCTGGCCCGTGGCCTGGCCGACCTGCTTGGCGAAGGCCCGTTCGTCACCTTGCCATTGGGCGCCAGTGAAGAGCGGCTGGTCGGCACCCTCGACCTGGATGCCGCGCTGGGGCAGG < 2:344513/148‑1ATCGAAGGGCCGCGTGGCATGGCCAAGAGCACCCTGGCCCGTGGCCTGGCCGACCTGCTTGGCGAAGGCCCGTTCGTCACCTTGCCATTGGGCGCCAGTGAAGAGCGGCTGGTCGGCACCCTCGACCTGGTTGCCGCGCTGGGGCAGGG > 3:256377/1‑149 TCACCTTGCCATTGGGCGCCAGTGAAGAGCGGCTGGTCGGCACCCTCGACCTGGATGCCGCGCTGGGGCAGGGCAAGGTGACGAACGGGCCTTCGCCAAGCAGGTCGGCCAGGCCACGGGCCAGGGTGCTCTTGGCCATGCCACGCGGC > 4:229253/1‑149 CCTTGCCATTGGGCGCCAGTGAAGAGCGGCTGGTCGGCACCCTCGACCTGGATGCCGCGCTGGGGCAGGGCAAGGTGACGAACGGGCCTTCGCCAAGCAGGTCGGCCAGGCCACGGGCCAGGGTGCTCTTGGCCATGCCACGCGGCCCT > 7:40043/1‑149 CCATTGGGCGCCAGTGAAGAGCGGCTGGTCGGCACCCTCGACCTGGATGCCGCGCTGGGGCAGGGCAAGGTGACGAACGGGCCTTCGCCAAGCAGGTCGGCCAGGCCACGGGCCAGGGTGCTCTTGGCCATGCCACGCGGCCCTTCGAT < 8:40043/149‑1 GCACCCTCGACCTGGATGCCGCGCTGGGGCAGGGCAAGGTGACGAACGGGCCTTCGCCAAGCAGGTCGGCCAGGCCACGGGCCAGGGTGCTCTTGGCCATGCCACGCGGCCCTTCGATCAACACACCACCGATCCTGGGGTCGATAGCG < 3:229253/149‑1 CAAGGTGACGAACGGGCCTTCGCCAAGCAGGTCGGCCAGGCCACGGGCCAGGGTGCTCTTGGCCATGCCACGCGGCCCTTCGATCAACACACCACCGATCCTGGGGTCGATAGCGGTCAGG < 5:204561/121‑1 CAAGGTGACGAACGGGCCTTCGCCAAGCAGGTCGGCCAGGCCACGGGCCAGGGTGCTCTTGGCCATGCCACGCGGCCCTTCGATCAACACACCACCGATCCTGGGGTCGATAGCGGTCAGG > 6:204561/1‑121 ATCGAAGGGCCGCGTGGCATGGCCAAGAGCACCCTGGCCCGTGGCCTGGCCGACCTGCTTGGCGAAGGCCCGTTCGTCACCTTGCCATTGGGCGCCAGTGAAGAGCGGCTGGTCGGCACCCTCGACCTGGATGCCGCGCTGGGGCAGGGCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3976762‑3976609‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaaggTGACGAACGGGCCTTCGCCAAGCAGGTCGGCCAGGCCACGGGCCAGGGTGCTCTTGGCCATGCCACGCGGCCCTTCGATCAACACACCACCGATCCTGGGGTCGATAGCGGTCAGG > NC_002947/3976684‑3976799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |