New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3987701	55 (1.020)	3 (0.060)	3/250	NT	5.5%	coding (219/2085 nt)	oplA	5‑oxoprolinase A
	?	NC_002947	= 3987739	51 (0.980)					coding (257/2085 nt)	oplA	5‑oxoprolinase A

GACGGCGGCGTGCAGCTGTTCAAGGCCCCGTCCACGCCCCAGGACGGCACCCTGGCCATTCGCGCCGGCCTGGCACAGATCGCCGACGCCACCGGGCGTAGCCCGGCCGAACTGATCGCCAACTGTGACCTGTGCATCAACGGCACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3987552‑3987701 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccTTGACCCCGGTGCGCTCGATCAGCGCGTTGAGGGCCACGGTGGTGCCGTTGATGCACAGGTCACAGTTGGCGATCAGTTCGGCCGGGCTACGCCCGGTGGCGTCGGCGATCTGTGCCAGGCCGGCGCGAATGGCCAGGGTGCCGTCCT  <  NC_002947/3987739‑3987592                                                                                                                                                                                                                                                                                                            GACGGCGGCGTGCAGCTGTTCAAGGCCCCGTCCACGCCCCAGGACGGCACCCTGGCCATTCGCGCCGGCCTGGCACAGATCGCCGACGCCACCGGGCGTAGCCCGGCCGAACTGATCGCCAACTGTGACCTGTGCATCAACGGCACCAC                                                                                                                                                       >  8:222794/1‑149                                           GACGGCACCCTGGCCATTCGCGCCGGCCTGGCACAGATCGCCGACGCCACCGGGCGTAGCCCGGCCGAACTGATCGCCAACTGTGACCTGTGCATCAACGGCACCACCTTGACCCCGGTGCGCTCGATCAGCGCGTTGAGGGCCACGGT                                                                                                             <  5:5231/149‑1                                                                      CTGGCACAGATCGCCGACGCCACCGGGCGTAGCCCGGCCGAACTGATCGCCAACTGTGACCTGTGCATCAACGGCACCACCTTGACCCCGGTGCGCTCGATCAGCGCGTTGAGGGCCACGGTGGTGC                                                                                                        >  3:277072/1‑127                                                                      CTGGCACAGATCGCCGACGCCACCGGGCGTAGCCCGGCCGAACTGATCGCCAACTGTGACCTGTGCATCAACGGCACCACCTTGACCCCGGTGCGCTCGATCAGCGCGTTGAGGGCCACGGTGGTGC                                                                                                        <  4:277072/127‑1                                                                                                                                                  CCACCTTGACCCCGGTGCGCTCGATCAGCGCGTTGAGGGCCACGGTGGTGCCGTTGATGCACAGGTCACAGTTGGCGATCAGTTCGGCCGGGCTACGCCCGGTGGCGTCGGCGATCTGTGCCAGGCCGGCGCGAATGGCCAGGGTGCCG      >  2:205510/1‑149                                                                                                                                                  CCACCTTGACCCCGGTGCGCTCGATCAGCGCGTTGAGGGCCACGGTGGTGCCGTTGATGCACAGGTCACAGTTGGCGATCAGTTCGGCCGGGCTACGCCCGGTGGCGTCGGCGATCTGTGCCAGGCCGGCGCGAATGGCCAGGGTGCCG      >  3:274773/1‑149                                                                                                                                                    ACCTTGACCCCGGTGCGCTCGATCAGCGCGTTGAGGGCCACGGTGGTGCCGTTGATGCACAGGTCACAGTTGGCGATCAGTTCGGCCGGGCTACGCCCGGTGGCGTCGGCGATCTGTGCCAGGCCGGCGCGAATGGCCAGGGTGCCGT     >  6:261956/1‑148                                                                                                                                                     CCTTGACCCCGGTGCGCTCGATCAGCGCGTTGAGGGCCACGGTGGTGCCGTTGATGCACAGGTCACAGTTGGCGATCAGTTCGGCCGGGCTACGCCCGGTGGCGTCGGCGATCTGTGCCAGGCCGGCGCGAATGGCCAGGGTGCCGTCC   >  1:331012/1‑149                                                                                                                                                      CTTGACCCCGGTGCGCTCGATCAGCGCGTTGAGGGCCACGGTGGTGCCGTTGATGCACAGGTCACAGTTGGCGATCAGTTCGGCCGGGCTACGCCCGGTGGCGTCGGCGATCTGTGCCAGGCCGGCGCGAATGGCCAGGGTGCCGTCCT  >  3:335894/1‑149                                                                                                                                                                                                                                                                                                            GACGGCGGCGTGCAGCTGTTCAAGGCCCCGTCCACGCCCCAGGACGGCACCCTGGCCATTCGCGCCGGCCTGGCACAGATCGCCGACGCCACCGGGCGTAGCCCGGCCGAACTGATCGCCAACTGTGACCTGTGCATCAACGGCACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3987552‑3987701 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccTTGACCCCGGTGCGCTCGATCAGCGCGTTGAGGGCCACGGTGGTGCCGTTGATGCACAGGTCACAGTTGGCGATCAGTTCGGCCGGGCTACGCCCGGTGGCGTCGGCGATCTGTGCCAGGCCGGCGCGAATGGCCAGGGTGCCGTCCT  <  NC_002947/3987739‑3987592

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.