| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4079414 = | 44 (0.810) | 5 (0.110) | 5/212 | NT | 12.5% | intergenic (‑218/+166) | sdaC/amaC | serine:H+ symport permease/D‑lysine aminotransferase |
| ? | NC_002947 | 4079531 = | 34 (0.770) | intergenic (‑335/+49) | sdaC/amaC | serine:H+ symport permease/D‑lysine aminotransferase | |||||
AAGTAACTCGCCAACGGGCCAACTGCGGCCCCTCCTGTGGGGCGCGGTTGGACTTTGTGGGAGCGGCCTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4079585‑4079414‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgacgcaaggccgctcccacaAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGTCGATCAGGTACACGC > NC_002947/4079531‑4079677 AAGTAACTCGCCAACGGGCCAACTGCGGCCCCTCCTGTGGGGCGCGGTTGGACTTTGTGGGAGCGGCCTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTAT > 1:6941/1‑149AAGTAACTCGCCAACGGGCCAACTGCGGCCCCTCCTGTGGGGCGCGGTTGGACTTTGTGGGAGCGGCCTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTAT > 5:30726/1‑149 GTAACTCGCCAACGGGCCAACTGCGGCCCCTCCTGTGGGGCGCGGTTGGACTTTGTGGGAGCGGCCTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCG < 2:6941/149‑1 ACTCGCCAACGGGCCAACTGCGGCCCCTCCTGTGGGGCGCGGTTGGACTTTGTGGGAGCGGCCTTTCGTCGCGAAAAGGGTGCGGAGCGCCCCTACCATTTCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGA > 6:317295/1‑149 CTCGCCAACGGGCCAACTGCGGCCCCTCCTGTGGGGCGCGGTTGGACTTTGTGGGAGCGGCCTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGAC < 8:166409/149‑1 AACGGGCCAACTGCGGCCCCTCCTGTGGGGCGCGGTTGGACTTTGTGGGAGCGGCCTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGG > 8:85225/1‑149 AACGGGCCAACTGCGGCCCCTCCTGTGGGGCGCGGTTGGACTTTGTGGGAGCGGCCTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGG < 6:80927/149‑1 ACGGGCCAACTGCGGCCCCTCCTGTGGGGCGCGGTTGGACTTTGTGGGAGCGGCCTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGC < 6:30726/149‑1 CCAACTGCGGCCCCTCCTGTGGGGCGCGGTTGGACTTTGTGGGAGCGGCCTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTC < 7:85225/149‑1 CTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTG > 5:71124/1‑149 GTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAG > 6:163590/1‑149 CGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCG < 6:71124/149‑1 AAATTGCTGGGGCCGATTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAAATTCCAACCTCGCCCCACAGGAGGGGCCGGAGTTGTCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTG < 5:163590/147‑1 GGCCCTATCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACCTGCA > 8:48119/1‑149 TCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACAC < 7:48119/147‑1 GCGACGCAAGGCCACTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCC < 1:125356/149‑1 GCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGT > 4:270864/1‑149 CGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGTCGATCAG < 3:285742/149‑1 GCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGTCGATCAGG < 3:170663/149‑1 CTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGTCGATCAGGT < 7:166409/149‑1 CCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGTCGATCAGGTACA > 3:78072/1‑149 CCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGTCGATCAGGTACA > 7:238118/1‑149 CCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGTCGATCAGGTACA > 2:317442/1‑149 CCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATG < 6:204758/121‑1 CCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATG > 5:204758/1‑121 CACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGTCGATCAGGTACAC > 6:233213/1‑149 ACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGTCGATCAG > 4:137567/1‑142 ACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGTCGATCAG < 3:137567/142‑1 CAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGTCGATCAGGTACACGC < 1:317442/149‑1 AAGTAACTCGCCAACGGGCCAACTGCGGCCCCTCCTGTGGGGCGCGGTTGGACTTTGTGGGAGCGGCCTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4079585‑4079414‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgacgcaaggccgctcccacaAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGTCGATCAGGTACACGC > NC_002947/4079531‑4079677 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |