New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4237457 =	57 (1.050)	3 (0.060)	3/250	NT	6.5%	coding (793/1122 nt)	catB	muconate cycloisomerase 1
	?	NC_002947	4237489 =	32 (0.620)					coding (761/1122 nt)	catB	muconate cycloisomerase 1

GATCGAAAGCGTCGAGGACGCCTTCAGCCTGGCCGCCGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4237497‑4237457 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacgCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTGGCCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGG  >  NC_002947/4237489‑4237632                                                                                                                                                                                           GATCGAAAGCGTCGAGGACGCCTTCAGCCTGGCCGCCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTGGCCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGAT                                                   <  3:90271/136‑1 GATCGAAAGCGTCGAGGACGCCTTCAGCCTGGCCGCCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTGGCCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGAT                                                   >  4:90271/1‑136      AAAGCGTCGAGGACGCCTTCAGCCTGGCCGCCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGAGCTGGTTCAGGCGCACCTGGCCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATAAGGTCGATGCCGTTGTC                                 >  8:6547/1‑149                              gccaagaCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTGGCCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGA          <  3:180020/141‑1                                      GACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTGGCCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCTGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGG  <  1:62346/148‑1                                                                                                                                                                                           GATCGAAAGCGTCGAGGACGCCTTCAGCCTGGCCGCCGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4237497‑4237457 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacgCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTGGCCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGG  >  NC_002947/4237489‑4237632

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.