| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4442451 = | 50 (0.920) | 4 (0.080) | 4/246 | NT | 6.9% | coding (80/1293 nt) | nicP‑II | porin‑like protein |
| ? | NC_002947 | 4442498 = | 61 (1.190) | coding (33/1293 nt) | nicP‑II | porin‑like protein | |||||
GATGCAACCCGCACGCCGGTGGCCATGCAGTGCCGCCGCGCCGGGTTGCTGTTGCCCAAATCCAGGAGTAGCCCTATGCAAGGTTTCACTGCGCCGCGTTTTTCTTCGTCTGCACGCCTGGCCGGCGGTTGTATTGCCGCCGCTTTGTGTGCAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4442605‑4442451‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcagaCGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACAGCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTG > NC_002947/4442498‑4442644 GATGCAACCCGCACGCCGGAGGCCATGCAGTGCCGCCGCGCCGGGTTGCTGTTGCCCAAATCCAGGAGTAGCCCTATGCAAGGTTTCACTGCGCCGCGTTTTTCTTCGTCTGCACGCCTGGCCGGCGGTTGTATTGCCGCCGCTTTGTG > 6:301134/1‑149 ATGCAACCCGCACGCCGGTGGCCATGCAGTGCCGCCGCGCCGGGTTGCTGTTGCCCAAATCCAGGAGTAGCCCTATGCAAGGTTTCACTGCGCCGCGTTTTTCTTCGTCTGCACGCCTGGCCGGCGGTTGTATTGCCGCCGCTTTGTGT < 7:187990/149‑1 TGCAACCCGCACGCCGGTGGCCATGCAGTGCCGCCGCGCCGGGTTGCTGTTGCCCAAATCCAGGAGTAGCCCTATGCAAGGTTTCACTGCGCCGCGTTTTTCTTCGTCTGCACGCCTGGCCGGCGGTTGTATTGCCGCCGCTTTGTGTG < 4:87288/149‑1 TGCAACCCGCACGCCGGTGGCCATGCAGTGCCGCCGCGCCGGGTTGCTGTTGCCCAAATCCAGGAGTAGCCCTATGCAAGGTTTCACTGCGCCGCGTTTTTCTTCGTCTGCACGCCTGGCCGGCGGTTGTATTGCCGCCGCTTTGTGTG < 5:177043/149‑1 CGTCTGCACGCCTGGCCGGCGGTTGTATTGCCGCCGCTTTGTGTGCAGACGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACAGCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGG > 8:308646/1‑149 TCTGCACGCCTGGCCGGCGGTTGTATTGCCGCCGCTTTGTGTGCAGACGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACAGCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGT > 7:174306/1‑149 ACGCCTGGCCGGCGGTTGTATTGCCGCCGCTTTGTGTGCAGACGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACAGCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCAT < 7:308646/149‑1 ATTGCCGCCGCTTTGTGTGCAGACGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACAGCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGC < 8:174306/148‑1 GACGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACAGCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTG > 2:130025/1‑149 GACGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACAGCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTG < 2:43667/149‑1 GACGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACAGCAACCCGGCGCGGCGGCAC > 3:125329/1‑81 GACGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACAGCAACCCGGCGCGGCGGCAC < 4:125329/81‑1 GATGCAACCCGCACGCCGGTGGCCATGCAGTGCCGCCGCGCCGGGTTGCTGTTGCCCAAATCCAGGAGTAGCCCTATGCAAGGTTTCACTGCGCCGCGTTTTTCTTCGTCTGCACGCCTGGCCGGCGGTTGTATTGCCGCCGCTTTGTGTGCAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4442605‑4442451‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcagaCGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACAGCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTG > NC_002947/4442498‑4442644 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |