New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4474272 =	56 (1.040)	9 (0.180)	6/244	NT	14.6%	coding (1264/1536 nt)	PP_3964	transposase
	?	NC_002947	= 5038176	NA (NA)					coding (1268/1536 nt)	PP_4443	transposase

CATGAGTGATGAAGAGCGCTGGCGAATACGACAAGAATTGGCGGTGCCGATCCTCAAAAAACTGCATGACTGGATGTTGGCTCAGCGAGACCTGGTGCCCAATGGATCAGCCACGGCCAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4474426‑4474272 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtagcgcGTCAGCGCTACCCAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGGGCCAACATCCACTCATGCAGTGTTTTGCTGATCGGTACCGCCAGTTCCTGCCGTATTCGCCAAC  <  NC_002947/5038176‑5038035                                                                                                                                                                                                                                                                                                           CATGAGTGATGAAGAGCGCTGGCGAATACGACAAGAATTGGCGGTGCTGATCCTCAAAAAACTGCATGACTGGATGTTGGCTCAGCGAGACCTGGTTCCCAATGGATCAGCCATGGCCAAAGCCTTCGATTACAGCCTGAAACGCTGGG                                                                                                                                                      <  8:51167/149‑1   TGAGTGATGAAGAGCGCTGGCGAATACGACAAGAATTGGCGGTGCCGATCCTCAAAAAACTGCATGACTGGATGTTGGCTCAGCGAGACCTGGTGCCCAATGGATCAGCCACGGCCAAAGCCCTCGATTACAGCCTGAAACGCTGGGTA                                                                                                                                                    <  6:123823/149‑1    GAGTGATGAAGAGCGCTGGCGAATACGACAAGAATTGGCGGTGCCGATCCTCAAAAAACTGCATGACTGGATGTTGGCTCAGCGAGACCTGGTGCCCAATGGATCAGCCACGGCCAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAG                                                                                                                                                   >  6:345036/1‑149             AGAGCGCTGGCGAATACGACAAGAATTGGCGGTGCCGATCCTCAAAAAACTGCATGACTGGATGTTGGCTCAGCGAGACCTGGTGCCCAATGGATCAGCCACGGCCAAAGCCCTCGATTACAGCCTGAAACGCTGGG                                                                                                                                                      >  5:81261/1‑137             AGAGCGCTGGCGAATACGACAAGAATTGGCGGTGCCGATCCTCAAAAAACTGCATGACTGGATGTTGGCTCAGCGAGACCTGGTGCCCAATGGATCAGCCACGGCCAAAGCCCTCGATTACAGCCTGAAACGCTGGG                                                                                                                                                      <  6:81261/137‑1                  GCTGGCGAATACGACAAGAATTGGCGGTGCCGATCCTCAAAAAACTGCATGACTGGATGTTGGCTCAGCGAGACCTGGTGCCCAATGGATCAGCCACGGCCAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCGTCAGCGCTAC                                                                                                                                     >  6:333214/1‑149                  GCTGGCGAATACGACAAGAATTGGCGGTGCCGATCCTCAAAAAACTGCATGACTGGATGTTGGCTCAGCGAGACCTGGTGCCCAATGGATCAGCCACGGCCAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCGTCAGCGCTAC                                                                                                                                     >  8:261151/1‑149                                   GAATTGGCGGTGCCGATCCTCAAAAAACTGCATGACTGGATGTTGGCTCAGCGAGACCTGGTGCCCAATGGATCAGCCACGGCCAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCG                                                                                                                                                 <  8:59333/120‑1                                   GAATTGGCGGTGCCGATCCTCAAAAAACTGCATGACTGGATGTTGGCTCAGCGAGACCTGGTGCCCAATGGATCAGCCACGGCCAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCG                                                                                                                                                 >  7:59333/1‑120                                          CGGTGCCGATCCTCAAAAAACTGCATGACTGGATGTTGGCTCAGCGAGACCTGGTGCCCAATGGATCAGCCACGGCCAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAG                                                                                                             <  5:333214/149‑1                                          CGGTGCCGATCCTCAAAAAACTGCATGACTGGATGTTGGCTCAGCGAGACCTGGTGCCCAATGGATCAGCCACGGCCAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAG                                                                                                             <  7:261151/149‑1                                                   tcagCAAAACACTGCATGAGTGGATGTTGGCCCAGCGTGACCTGGTGCCCAACGGATCAGCCACAGCCAAAGCCCTCGACTACAGCCTGAAACGCTGGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGC                                                                                                    >  7:150200/5‑149                                                        AAAACACTGCATGAGTGGATGTTGGCCCAGCGTGACCTGGTGCCCAACGGATCAGCCACAGCCAAAGCCCTCGACTACAGCCTGAAACGCTGGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGG                                                                                               <  8:150200/149‑1                                                         AAACACTGCATGAGTGGATGTTGGCCCAGCGTGACCTGGTGCCCAACGGATCAGCCACAGCCAAAGCCCTCGACTACAGCCTGAAACGCTGGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAGTCGAGGGCT                                                                                                         <  8:259206/138‑1                                                         AAACACTGCATGAGTGGATGTTGGCCCAGCGTGACCTGGTGCCCAACGGATCAGCCACAGCCAAAGCCCTCGACTACAGCCTGAAACGCTGGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAGTCGAGGGCT                                                                                                         >  7:259206/1‑138                                                                                                                                       GCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGGGCCAACATCCACTCATGCAGTGTTTTGCTGATCGGTACCGCCAGTTCCTG                >  2:129780/1‑149                                                                                                                                                     GTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAAGTCACGCTGGGCCAACATCCACTCATGCAGTGTTTTGCTGATCGGTACCGCCAGTTCCTGCCGTATTCGCCAAC  >  8:130945/1‑149                                                                                                                                                                                                                                                                                                           CATGAGTGATGAAGAGCGCTGGCGAATACGACAAGAATTGGCGGTGCCGATCCTCAAAAAACTGCATGACTGGATGTTGGCTCAGCGAGACCTGGTGCCCAATGGATCAGCCACGGCCAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4474426‑4474272 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtagcgcGTCAGCGCTACCCAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGGGCCAACATCCACTCATGCAGTGTTTTGCTGATCGGTACCGCCAGTTCCTGCCGTATTCGCCAAC  <  NC_002947/5038176‑5038035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.