New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4554799	51 (0.940)	3 (0.060)	3/252	NT	5.7%	coding (127/1797 nt)	PP_4041	glycoside hydrolase
	?	NC_002947	= 4554878	50 (0.950)					coding (48/1797 nt)	PP_4041	glycoside hydrolase

GCTGCTGTGCGTTACCGGGTCGCAAGGGGCCAGGCGCCAGCGGCCATTTTCTTCGTTGCCCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4554734‑4554799 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagTGCGGCGCTGGTCAGCCGCGATGGCGCGCTGGACTGGCTGTGCCTGCCACGCTTCGACGCCCCCGCGGTGTTCGCGGCCCTGCT  <  NC_002947/4554878‑4554795                                                                                                                                                        GCTGCTGTGCGTAACCGGGTCGCAAGGGGCCAGGCGCCAGCGGCCATTTTCTTCGTTGCCCAGCAGTGCGGCGCTGGTCAGCCGCGATGGCGCGCTGGACTGGCTGTGCCTGCCACGCTTCGACGCCCCCGCGGTGTTCGCGGCCCTGC   <  3:12610/149‑1                                      CAGCGGCCATTTTCTTCGTTGCCCAGCAGTGCGGCGCTGGTCAGCCGCGATGGCGCGCTGGACTGGCTGTGCCTGCCACGCTTCGACGCCCCCGCGGTGTTCGCGGCCCTGCT  >  3:291466/1‑113                                      CAGCGGCCATTTTCTTCGTTGCCCAGCAGTGCGGCGCTGGTCAGCCGCGATGGCGCGCTGGACTGGCTGTGCCTGCCACGCTTCGACGCCCCCGCGGTGTTCGCGGCCCTGCT  <  4:291466/113‑1                                                                                                                                                        GCTGCTGTGCGTTACCGGGTCGCAAGGGGCCAGGCGCCAGCGGCCATTTTCTTCGTTGCCCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4554734‑4554799 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagTGCGGCGCTGGTCAGCCGCGATGGCGCGCTGGACTGGCTGTGCCTGCCACGCTTCGACGCCCCCGCGGTGTTCGCGGCCCTGCT  <  NC_002947/4554878‑4554795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.