New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4581379 =	63 (1.160)	4 (0.080)	4/244	NT	6.5%	coding (2049/3321 nt)	treSB	bifunctional trehalose synthase B/maltokinase
	?	NC_002947	4581481 =	56 (1.100)					coding (1947/3321 nt)	treSB	bifunctional trehalose synthase B/maltokinase

TCGGCACCGCCACCACGCCGGTGTTGCTCAGCGAAATCGAGGTGCTCAGCGACGGCACGGCCACCCGCTACCAGCTGCCGTTCGGCCTGCTGCGTGAGGAACAGATCCATACCGCGCTGCCGCAGCAGCTGGCGTTGTCGCGGGTGCGCCGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4581533‑4581379 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtgccGTCGCTGAGCACCTCGATTTCGCTGAGCAACACCGGCGTGGTGGCGGTGCCGAAACGCACGCCGTAGCACAGGCGCACGGCATCGATCGGCCCTTCCTTGCCGGCGAACCAGCGGCGCTTGGGCAGGTACTGCGGCAGGATGGTGCTT  >  NC_002947/4581481‑4581628                                                                                                                                                                                                                                                                                                                 TCGGCACCGCCACCACGCCGGTGTTGCTCAGCGAAATCGAGGTGCTCAGCGACGGCACGGCCACCCGCTACCAGCTGCCGTTCGGCCTGCTGCGTGAGGAACAGATCCATACCGCGCTGCCGCAGCAGCTGGCGTTGTCGCGGGTGCG                                                                                                                                                             <  8:106084/148‑1      ACCGCCACCACGCCGGTGTTGCTCAGCGAAATCGAGGTGCTCAGCGACGGCACGGCCACCCGCTACCAGCTGCCGTTCGGCCTGCTGCGTGAGGAACAGATCCATACCGCGCTGCCGCAGCAGCTGGCGTTGTCGCGGGTGCGCCGTGC                                                                                                                                                       >  3:42118/1‑149      ACCGCCACCACGCCGGTGTTGCTCAGCGAAATCGAGGTGCTCAGCGACGGCACGGCCACCCGCTACCAGCTGCCGTTCGGCCTGCTGCGTGAGGAACAGATCCATACCGCGCTGCCGCAGCAGCTGGCGTTGTCGCGGGTGCGCCGTGC                                                                                                                                                       >  7:167623/1‑149                                                           GGCCACCCGCTACCAGCTGCCGTTCGGCCTGCTGCGTGAGGAACAGATCCATACCGCGCTGCCGCAGCAGCTGGCGTTGTCGCGGGTGCGCCGTGCCGTCGCTGAGCACCTCGATTTCGCTGAGCAACACCGGCGTGGTGGCGGTGCC                                                                                                   >  2:144429/1‑148                                                            GCCACCCGCTACCAGCTGCCGTTCGGCCTGCTGCGTGAGGAACAGATCCATACCGCGCTGCCGCAGCAGCTGGCGTTGTCGCGGGTGCGCCGTGCCGTCGCTGAGCACCTCGATTTCGCTGAGCAACACCGGCGTGGTGGCGGTGCCG                                                                                                  >  8:10961/1‑148                                                                                          CTGCGTGAGGAACAGATCCATACCGCGCTGCCGCAGCAGCTGGCGTTGTCGCGGGTGCGCCGTGCCGTCGCTGAGCACCTCGATTTCGCTGAGCAACACCGGCGTGGTGGCGGTGCCGAAACGCACGCCGTAGCACAGGCGCACGGCA                                                                    <  1:144429/148‑1                                                                                                                                             CGGGTGCGCCGTGCCGTCGCTGAGCACCTCGATTTCGCTGAGCAACACCGGCGTGGTGGCGGTGCCGAAACGCACGCCGTAGCACAGGCGCACGGCATCGATCGGCCCTTCCTTGCCGGCGAACCAGCGGCGCTTGGGCAGGTACTGCG                <  7:10961/149‑1                                                                                                                                                      CGTGCCGTCGCTGAGCACCTCGATTTCGCTGAGCAACACCGGCGTGGTGGCGGTGCCGAAACGCACGCCGTAGCACAGGCGCACGGCATCGATCGGCCCTTCCTTGCCGGCGAACCAGCGGCGCTTGGGCAGGTACTGCGGCAGGATGG       >  5:316082/1‑149                                                                                                                                                       GTGCCGTCGCTGAGCACCTCGATTTCGCTGAGCAACACCGGCGTGGTGGCGGTGCCGAAACGCACGCCGTAGCACAGGCGCACGGCATCGATCGGCCCTTCCTTGCCGGCGAACCAGCGGCGCTTGGGCAGGTACTGCGGCAGGATGGT      <  5:135619/149‑1                                                                                                                                                         GCCGTCGCTGAGCACCTCGATTTCGCTGAGCAACACCGGCGTGGTGGCGGTGCCGAAACGCACGCCGTAGCACAGGCGCACGGCATCGATCGGCCCTTCCTTGCCGGCGAACCAGCGGCGCTTGGGCAGGTAC                    >  3:74024/1‑133                                                                                                                                                         GCCGTCGCTGAGCACCTCGATTTCGCTGAGCAACACCGGCGTGGTGGCGGTGCCGAAACGCACGCCGTAGCACAGGCGCACGGCATCGATCGGCCCTTCCTTGCCGGCGAACCAGCGGCGCTTGGGCAGGTAC                    <  4:74024/133‑1                                                                                                                                                           CGTCGCTGAGCACCTCGATTTCGCTGAGCAACACCGGCGTGGTGGCGGTGCCGAAACGCACGCCGTAGCACAGGCGCACGGCATCGATCGGCCCTTCCTTGCCGGCGAACCAGCGGCGCTTGGGCAGGTACTGCGGCAGGATGGTGCTT  >  1:67735/1‑149                                                                                                                                                                                                                                                                                                                 TCGGCACCGCCACCACGCCGGTGTTGCTCAGCGAAATCGAGGTGCTCAGCGACGGCACGGCCACCCGCTACCAGCTGCCGTTCGGCCTGCTGCGTGAGGAACAGATCCATACCGCGCTGCCGCAGCAGCTGGCGTTGTCGCGGGTGCGCCGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4581533‑4581379 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtgccGTCGCTGAGCACCTCGATTTCGCTGAGCAACACCGGCGTGGTGGCGGTGCCGAAACGCACGCCGTAGCACAGGCGCACGGCATCGATCGGCCCTTCCTTGCCGGCGAACCAGCGGCGCTTGGGCAGGTACTGCGGCAGGATGGTGCTT  >  NC_002947/4581481‑4581628

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.