New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4751446 =61 (1.130)3 (0.060) 3/246 NT 5.3% coding (726/1326 nt) PP_4206 MFS transporter
?NC_002947 4751509 = 49 (0.960)coding (663/1326 nt) PP_4206 MFS transporter

TTACGCCTGGCGCTACCCGTTCCTGTTGGGTGGGGTGTTTGGTGTGATTGGTGTGTGGCTGCGCCGCTGGCTCAGTGAAACACCGGTGTTCCTCGCCCTGCGCGCGCGCCAGGAGCAACCTGTGACGTTTCCGCTGCGGCAAGTGCTGGGCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4751599‑4751446
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgagGAACACCGGTGTTTCACTGAGCCAGCGGCGCAGCCACACACCAATCACACCAAACACCCCACCCAACAGGAACGGGTAGCGCCAGGCGTAATCGAGGATTTCCTGCGGGGTGAACAGTTGCGCCAGCAAAGTTGCGGTCAGCGCCCCC  >  NC_002947/4751509‑4751656
                                                                                                                                                                                                                                                                                                              
TTACGCCTGGCGCTACCCGTTCCTGTTGGGTGGGGTGTTTGGTGTGATTGGTGTGTGGCTGCGCCGCTGGCTCAGTGAAACACCGGTGTTCCTCGCCCTGCGCGCGCGCCAGGAGCAACCTGTGACGTTTCCGCTGCGGCAAGTGCTGG                                                                                                                                                           <  2:25009/149‑1
   CGCCTGGCGCTACCCGTTCCTGTTGGGTGGGGTGTTTGGTGTGATTGGTGTGTGGCTGCGCCGCTGGCTCAGTGAAACACCGGTGTTCCTCGCCCTGCGCGCGCGCCAGGAGCAACCTGTGACGTTTCCGCTGCGGCAAGTGCTGGGCG                                                                                                                                                        <  4:183691/149‑1
                                                                                          CCTCGCCCTGCGCGCGCGCCAGGAGCAACCTGTGACGTTTCCGCTGCGGCAAGTGCTGGGCGAGGAACACCGGTGTTTCACTGAGCCAGCGGCGCAGCCACACACCAATCACACCAAACACCCCACCCAACAGGAACGGGTAGCGCCAG                                                                 >  4:114448/1‑149
                                                                                            TCGCCCTGCGCGCGCGCCAGGAGCAACCTGTGACGTTTCCGCTGCGGCAAGTGCTGGGCGAGGAACACCGGTGTTTCACTGAGCCAGCGGCGCAGCCACACACCAATCACACCAAACACCCCACCCAACAGGAACGGGTAGCGCCAGGC                                                               >  7:2061/1‑149
                                                                                                           GCCAGGAGCAACCTGTGACGTTTCCGCTGCGGCAAGTGCTGGGCGAGGAACACCGGTGTTTCACTGAGCCAGCGGCGCAGCCACACACCAATCACACCAAACACCCCACCCAACAGGAACGGGTAGCGCCAGGCGTAATCGAGGATTTC                                                <  3:114448/149‑1
                                                                                                                                                      CGAGGAACACCGGTGTTTCACTGAGCCAGCGGCGCAGCCACACACCAATCACACCAAACACCCCACCCAACAGGAACGGGTAGCGCCAGGCGTAATCGAGGATTTCCTGCGGGGTGAACAGTTGCGCCAGCAAAGTTGCGGTCAGCGCC     <  1:40409/149‑1
                                                                                                                                                      CGAGGAACACCGGTGTTTCACTGAGCCAGCGGCGCAGCCACACACCAATCACACCAAACACCCCACCCAACAGGAACGGGTAGCGCCAGGCGTAATCGAGGATTTCCTGCGGGGTGAACAGTTGCGCCAGCAAAGTTGCGGTCAGCGCC     >  4:122894/1‑149
                                                                                                                                                         GGAACACCGGTGTTTCACTGAGCCAGCGGCGCAGCCACACACCAATCACACCAAACACCCCACCCAACAGGAACGGGTAGCGCCAGGCGTAATCGAGGATTTCCTGCGGGGTGAACAGTTGCGCCAGCAAAGTTGCGGTCAGCGCCCCC  <  5:35070/149‑1
                                                                                                                                                         GGAACACCGGTGTTTCACTGAGCCAGCGGCGCAGCCACACACCAATCACACCAAACACCCCACCCAACAGGAACGGGTAGCGCCAGGCGTAATCGAGG                                                     <  1:125087/98‑1
                                                                                                                                                         GGAACACCGGTGTTTCACTGAGCCAGCGGCGCAGCCACACACCAATCACACCAAACACCCCACCCAACAGGAACGGGTAGCGCCAGGCGTAATCGAGG                                                     >  2:125087/1‑98
                                                                                                                                                                                                                                                                                                              
TTACGCCTGGCGCTACCCGTTCCTGTTGGGTGGGGTGTTTGGTGTGATTGGTGTGTGGCTGCGCCGCTGGCTCAGTGAAACACCGGTGTTCCTCGCCCTGCGCGCGCGCCAGGAGCAACCTGTGACGTTTCCGCTGCGGCAAGTGCTGGGCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4751599‑4751446
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgagGAACACCGGTGTTTCACTGAGCCAGCGGCGCAGCCACACACCAATCACACCAAACACCCCACCCAACAGGAACGGGTAGCGCCAGGCGTAATCGAGGATTTCCTGCGGGGTGAACAGTTGCGCCAGCAAAGTTGCGGTCAGCGCCCCC  >  NC_002947/4751509‑4751656

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.