| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4760846 = | 71 (1.310) | 4 (0.080) | 4/248 | NT | 6.0% | coding (908/1389 nt) | pvdM | dipeptidase |
| ? | NC_002947 | 4760894 = | 58 (1.120) | coding (956/1389 nt) | pvdM | dipeptidase | |||||
TTCTGGGTCAGCGGCTTGATGTAGGTGCCGAAGGCAACGATCTGGATGACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4760897‑4760846‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgacccAGAAGTCGCAAGAGCGCCTGAACAGCCTGCGCGCCGAGTACGGTCTGCCGCCCCTGGTCAACCAGGCCAATGCCTTGATGCCGGGCGACCCGATCATCGCCGGCTGGCCCGAGCAGAAAGTCGGCCAGTACGCCGAAGCGCTGTACG > NC_002947/4760894‑4761040 TTCTGGGTCAGCGGCTTGATGTAGGTGCCGAAGGCAACGATCTGGATGACCCAGAAGTCGCAAGAGCGCCTGAACAGCCTGCGCGCCGAGTACGGTCTGCCGCCCCTGGTCAACCAGGCCAATGCCTT > 5:210582/1‑128TTCTGGGTCAGCGGCTTGATGTAGGTGCCGAAGGCAACGATCTGGATGACCCAGAAGTCGCAAGAGCGCCTGAACAGCCTGCGCGCCGAGTACGGTCTGCCGCCCCTGGTCAACCAGGCCAATGCCTT < 6:210582/128‑1 CTGGGTCAGCGGCTTGATGTAGGTGCCGAAGGCAACGATCTGGATGACCCAGAAGTCGCAAGAGCGCCTGAACAGCCTGCGCGCCGAGTACGGTCTGCCGCCCCTGGTCAACCAGGCCAATGCCTTGATGCCGGGC > 7:266518/1‑136 CTGGGTCAGCGGCTTGATGTAGGTGCCGAAGGCAACGATCTGGATGACCCAGAAGTCGCAAGAGCGCCTGAACAGCCTGCGCGCCGAGTACGGTCTGCCGCCCCTGGTCAACCAGGCCAATGCCTTGATGCCGGGC < 8:266518/136‑1 ACCCAGAAGTCGCAAGAGCGCCTGAACAGCCTGCGCGCCGAGTACGGTCTGCCGCCCCTGGTCAAC > 5:88780/1‑66 ACCCAGAAGTCGCAAGAGCGCCTGAACAGCCTGCGCGCCGAGTACGGTCTGCCGCCCCTGGTCAAC < 6:88780/66‑1 CCAGAAGTCGCAAGAGCGCCTGAACAGCCTGCGCGCCGAGTACGGTCTGCCGCCCCTGGTCAACCAGGCCAATGCCTTGATGCCGGGCGACCCGATCATCGCCGGCTGGCCCGAGCAGAAAGTCGGCCAGTACGCCGAAGCGCTGTACG > 2:161609/1‑149 TTCTGGGTCAGCGGCTTGATGTAGGTGCCGAAGGCAACGATCTGGATGACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4760897‑4760846‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgacccAGAAGTCGCAAGAGCGCCTGAACAGCCTGCGCGCCGAGTACGGTCTGCCGCCCCTGGTCAACCAGGCCAATGCCTTGATGCCGGGCGACCCGATCATCGCCGGCTGGCCCGAGCAGAAAGTCGGCCAGTACGCCGAAGCGCTGTACG > NC_002947/4760894‑4761040 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |