| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4766543 | 63 (1.160) | 4 (0.080) | 4/246 | NT | 6.2% | coding (1196/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA |
| ? | NC_002947 | = 4766585 | 62 (1.210) | coding (1238/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA | |||||
CATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGGTGTTCGCCGAGGTCGATCACCGCTTCGACAACGACTGGCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4766391‑4766543‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcctTGCATGGCGAAGTCCGACCAGTTCTTGGACGCCGCCAGGTGCAGGCGCCAGTCGTTGTCGAAGCGGTGATCGACCTCGGCGAACACCGTAGTGTTATCGATGTCCTGGTAGCTCCAGTCGTAGCCCATATTGCGCGAACGCGAGTAG < NC_002947/4766585‑4766439 CATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGGTGTTCGCCGAGGTCGATCACCGCTTCGACAACGACTGGC > 1:42806/1‑149 CCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGGTGTTCGCCGAGGTCGATCACCGCTTCGACAACGACTGGCGCCTTGCATGGCGAAGTCCGACCAGTT > 3:37507/1‑149 AGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGGTGTTCGCCGAGGTCGATCACCGCTTCGACAACGACTGGCGCCTTGCATGGCGAAGTCCGACCAGTTCTTGGACGCC > 6:111519/1‑149 GCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGGTGTTCGCCGAGGTCGATCACCGCTTCGACAACGACTGGCGCCTTGCATGGCGAAGTCCGACCAGTTCTTGGACGCCGCCAGGTGCAGGCGC < 4:37507/147‑1 GCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGGTGTTCGCCGAGGTCGATCACCGCTTCGACAACGACTGGCGCCTTGCATGGCGAAGTCCGACCAGTTCTTGGACGCCGCCAGGTGCAGGCGCCAGTCGT < 5:111519/148‑1 GCGCCTTGCATGGCGAAGTCCGACCAGTTCTTGGACGCCGCCAGGTGCAGGCGCCAGTCGTTGTCGAAGCGGTGATCGACCTCGGCGAACACCGTAGTGTTATCGATGTCCTGGTAGCTCCAGTCGTAGCCCATATTGCGCGAACGCGA < 1:136551/149‑1 GCGCCTTGCATGGCGAAGTCCGACCAGTTCTTGGACGCCGCCAGGTGCAGGCGCCAGTCGTTGTCGAAGCGGTGATCGACCTCGGCGAACACCGTAGTGTTATCGATGTCCTGGTAGCTCCAGTCGTAGCCCATATTGCGCGAACGCGA < 5:259326/149‑1 CTTGCATGGCGAAGTCCGACCAGTTCTTGGACGCCGCCAGGTGCAGGCGCCAGTCGTTGTCGAAGCGGTGATCGACCTCGGCGAACACCGTAGTGTTATCGATGTCCTGGTAGCTCCAGTCGTAGCCCATATTGCGCGAACGCGAGTAG > 1:185211/1‑149 CATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGGTGTTCGCCGAGGTCGATCACCGCTTCGACAACGACTGGCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4766391‑4766543‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcctTGCATGGCGAAGTCCGACCAGTTCTTGGACGCCGCCAGGTGCAGGCGCCAGTCGTTGTCGAAGCGGTGATCGACCTCGGCGAACACCGTAGTGTTATCGATGTCCTGGTAGCTCCAGTCGTAGCCCATATTGCGCGAACGCGAGTAG < NC_002947/4766585‑4766439 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |