New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4818599 | 53 (0.980) | 5 (0.100) | 5/242 | NT | 9.5% | coding (12591/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
? | NC_002947 | = 4818610 | 46 (0.910) | coding (12580/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
GCTCGGCTTTGAGCACATCGGCCCAAATACCCGCCAACACGTCCTCCAATTCGTTGCGTGGCGCCAGATAGGCCTGACTGTACTGACCGCCGATGTCGATGGCTGGCAGGGCCTTGCGGTCGAGCTTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4818469‑4818599 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcttgccgCACAACGCCAACGGCAAGCTCGACCGCAAGGCCCTGCCAGCCATCGACATCGGCGGTCAGTACAGTCAGGCCTATCTGGCGCCACGCAACGAATTGGAGGACGTGTTGGCGGGTATTTGGGCCGATGTGCTCAAAGCCGAGCGGGT < NC_002947/4818610‑4818465 GCTCGGCTTTGAGCACATCGGCCCAAATACCCGCCAACACGTCCTCCAATTCGTTGCGTGGCGCCAGATAGGCCTCACTGTACTGACCGCCGATGTCGATGGCTAGCAGGGCCTTGCGGTCGAGCTTGCCGCACAACGCCAACGGCAAG < 2:305741/149‑1 GGCTTTGAGCACATCGGCCCAAATACCCGCCAACACGTCCTCCAATTCGTTGCGTGGCGCCAGATAGGCCTGACTGTACTGACCGCCGATGTCGATGGCTGGCAGGGCCTTGCGGTCGAGCTTGCCGCACAACGCCAACGGCAAGCT < 2:36721/147‑1 GTGGCGCCAGATAGGCCTGACTGTACTGACCGCCGATGTCGATGGCTGGCAGGGCCTTGCGGTCGAGCTTGCCGCACAACGCCAACGGCAAGC > 6:148515/1‑93 GCCAGATAGGCCTGACTGTACTGACCGCCGATGTCGATGGCTGGCAGGGCCTTGCGGTCGAGCTTGCCGCACAACGCCAACGGCAAGC < 5:181230/88‑1 GCCAGATAGGCCTGACTGTACTGACCGCCGATGTCGATGGCTGGCAGGGCCTTGCGGTCGAGCTTGCCGCACAACGCCAACGGCAAGC > 6:181230/1‑88 CCGCACAACGCCAACGGCAAGCTCGACCGCAAGGCCCTGCCAGCCATCGACATCGGCGGTCAGTACAGTCAGGCCTATCTGGCGCCACGCAACGAATTGGAGGACGTGTTGGCGGGTATTTGGGCCGATGTGCTCAAAGCCGAGCGGGT < 7:1578/149‑1 CCGCACAACGCCAACGGCAAGCTCGACCGCAAGGCCCTGCCAGCCATCGACATCGGCGGTCAGTACAGTCAGGCCTATCTGGCGCCACGCAACGAATTGGAGGACGTGTTGGCGGGTATTTGGGCCGATGTGCTCAAAGCCGAGCGGG < 1:333217/148‑1 GCTCGGCTTTGAGCACATCGGCCCAAATACCCGCCAACACGTCCTCCAATTCGTTGCGTGGCGCCAGATAGGCCTGACTGTACTGACCGCCGATGTCGATGGCTGGCAGGGCCTTGCGGTCGAGCTTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4818469‑4818599 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcttgccgCACAACGCCAACGGCAAGCTCGACCGCAAGGCCCTGCCAGCCATCGACATCGGCGGTCAGTACAGTCAGGCCTATCTGGCGCCACGCAACGAATTGGAGGACGTGTTGGCGGGTATTTGGGCCGATGTGCTCAAAGCCGAGCGGGT < NC_002947/4818610‑4818465 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |