| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4818599 | 53 (0.980) | 5 (0.100) | 5/242 | NT | 9.5% | coding (12591/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
| ? | NC_002947 | = 4818610 | 46 (0.910) | coding (12580/12954 nt) | pvdL | non‑ribosomal peptide synthetase | |||||
GCTCGGCTTTGAGCACATCGGCCCAAATACCCGCCAACACGTCCTCCAATTCGTTGCGTGGCGCCAGATAGGCCTGACTGTACTGACCGCCGATGTCGATGGCTGGCAGGGCCTTGCGGTCGAGCTTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4818469‑4818599‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcttgccgCACAACGCCAACGGCAAGCTCGACCGCAAGGCCCTGCCAGCCATCGACATCGGCGGTCAGTACAGTCAGGCCTATCTGGCGCCACGCAACGAATTGGAGGACGTGTTGGCGGGTATTTGGGCCGATGTGCTCAAAGCCGAGCGGGT < NC_002947/4818610‑4818465 GCTCGGCTTTGAGCACATCGGCCCAAATACCCGCCAACACGTCCTCCAATTCGTTGCGTGGCGCCAGATAGGCCTCACTGTACTGACCGCCGATGTCGATGGCTAGCAGGGCCTTGCGGTCGAGCTTGCCGCACAACGCCAACGGCAAG < 2:305741/149‑1 GGCTTTGAGCACATCGGCCCAAATACCCGCCAACACGTCCTCCAATTCGTTGCGTGGCGCCAGATAGGCCTGACTGTACTGACCGCCGATGTCGATGGCTGGCAGGGCCTTGCGGTCGAGCTTGCCGCACAACGCCAACGGCAAGCT < 2:36721/147‑1 GTGGCGCCAGATAGGCCTGACTGTACTGACCGCCGATGTCGATGGCTGGCAGGGCCTTGCGGTCGAGCTTGCCGCACAACGCCAACGGCAAGC > 6:148515/1‑93 GCCAGATAGGCCTGACTGTACTGACCGCCGATGTCGATGGCTGGCAGGGCCTTGCGGTCGAGCTTGCCGCACAACGCCAACGGCAAGC < 5:181230/88‑1 GCCAGATAGGCCTGACTGTACTGACCGCCGATGTCGATGGCTGGCAGGGCCTTGCGGTCGAGCTTGCCGCACAACGCCAACGGCAAGC > 6:181230/1‑88 CCGCACAACGCCAACGGCAAGCTCGACCGCAAGGCCCTGCCAGCCATCGACATCGGCGGTCAGTACAGTCAGGCCTATCTGGCGCCACGCAACGAATTGGAGGACGTGTTGGCGGGTATTTGGGCCGATGTGCTCAAAGCCGAGCGGGT < 7:1578/149‑1 CCGCACAACGCCAACGGCAAGCTCGACCGCAAGGCCCTGCCAGCCATCGACATCGGCGGTCAGTACAGTCAGGCCTATCTGGCGCCACGCAACGAATTGGAGGACGTGTTGGCGGGTATTTGGGCCGATGTGCTCAAAGCCGAGCGGG < 1:333217/148‑1 GCTCGGCTTTGAGCACATCGGCCCAAATACCCGCCAACACGTCCTCCAATTCGTTGCGTGGCGCCAGATAGGCCTGACTGTACTGACCGCCGATGTCGATGGCTGGCAGGGCCTTGCGGTCGAGCTTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4818469‑4818599‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcttgccgCACAACGCCAACGGCAAGCTCGACCGCAAGGCCCTGCCAGCCATCGACATCGGCGGTCAGTACAGTCAGGCCTATCTGGCGCCACGCAACGAATTGGAGGACGTGTTGGCGGGTATTTGGGCCGATGTGCTCAAAGCCGAGCGGGT < NC_002947/4818610‑4818465 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |