| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4828936 | 58 (1.070) | 4 (0.080) | 4/246 | NT | 7.2% | coding (2254/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
| ? | NC_002947 | = 4828975 | 48 (0.940) | coding (2215/12954 nt) | pvdL | non‑ribosomal peptide synthetase | |||||
CAGGGTCACCCACAGCTGATGCTCTTCGTCCCCCAGGCGCACCAGGGTTACCCGCAACAGCGGCCCCTGGGTGAGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4828787‑4828936‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggcgCTGCAGCGTATCCTGCCGCAGCAGCCGCTCAGCCTGCACCGCCTGGACCTTGAAGGGCACTCGCCCGAGCAGGTTGCCGCGCAGCGTGAAACCGAGGCCCGCCAGCCGTTCGACCTCACCCAGGGGCCGCTGTTGCGGGTAACCCTG < NC_002947/4828975‑4828829 CAGGGTCACCCACAGCTGATGCTCTTCGTCCCCCAGGCGCACCAGGGTTACCCGCAACAGCGGCCCCTGGGTGAGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGG < 2:3567/148‑1 TCCCCCAGGCGCACCAGGGTTACCCGCAACAGCGGCCCCTGGGTGAGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGGCGCTGCAGCGTATCCTGCCGCAGCAGCCG > 2:278340/1‑149 CCAGGGTTACCCGCAACAGCGGCCCCTGGGTGAGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGGCGCTGCAGCGTATCCTGCCGCAGCAGCCGCTCAGCCTGCACC > 3:252501/1‑149 AGGGTTACCCGCAACAGCGGCCCCTGGGTGAGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGGCGCTGCAGCGTATCCTGCCGCAGCAGCCGCTCAGCCTGCACCGC < 1:278340/149‑1 GTTACCCGCAACAGCGGCCCCTGGGTGAGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGGCGCTGCAGCGTATCCTGCCGCAGCAGCCGCTCAGCCTGCACCGCCTG < 4:252501/149‑1 CAGGCGCTGCAGCGTATCCTGCCGCAGCAGCCGCTCAGCCTGCACCGCCTGGACCTTGAAGGGCACTCGCCCGAGCAGGTTGCCGCGCAGCGTGAAACCGAGGCCCGCCAGCCGTTCGACCTCACCCAGGGGCCGCTGTTGCGGGTAAC > 2:251677/1‑149 AGGCGCTGCAGCGTATCCTGCCGCAGCTGCCGCTCAGCCTGCACCGCCTGGACCTTGAAGGGCACTCGCCCGAGCAGGTTGCCGCGCAGCGTGAAACCGAGGCCCGCCAGCCGTTCGACCTCACCCAGGGGCCGCTGTTGCGGGTAACC > 8:21217/1‑149 GCGCTGCAGCGTATCCTGCCGCAGCAGCCGCTCAGCCTGCACCGCCTGGACCTTGAAGGGCACTCGCCCGAGCAGGTTGCCGCGCAGCGTGAAACCGAGGCCCGCCAGCCGTTCGACCTCACCCAGGGGCCGCTGTTGCGGGTAACCCT < 5:317447/149‑1 CGCTGCAGCGTATCCTGCCGCAGCAGCCGCTCAGCCTGCACCGCCTGGACCTTGAAGGGCACTCGCCCGAGCAGGTTGCCGCGCAGCGTGAAACCGAGGCCCGCCAGCCGTTCGACCTCACCCAGGGGCCGCTGTTGCGGGTAACCCTG < 4:42424/149‑1 CAGGGTCACCCACAGCTGATGCTCTTCGTCCCCCAGGCGCACCAGGGTTACCCGCAACAGCGGCCCCTGGGTGAGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4828787‑4828936‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggcgCTGCAGCGTATCCTGCCGCAGCAGCCGCTCAGCCTGCACCGCCTGGACCTTGAAGGGCACTCGCCCGAGCAGGTTGCCGCGCAGCGTGAAACCGAGGCCCGCCAGCCGTTCGACCTCACCCAGGGGCCGCTGTTGCGGGTAACCCTG < NC_002947/4828975‑4828829 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |