New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5036927 =	NA (NA)	6 (0.120)	3/246	NT	NA	coding (19/1536 nt)	PP_4443	transposase
	?	NC_002947	5036999 =	NA (NA)					coding (91/1536 nt)	PP_4443	transposase

GTGGCGTTTGAGCAGGGCGATTTCGAACTTGAATTGTTCGATGAGGATTTCGTCGTTCTGGATCTTCCGGCTCATCGCCTCGACCTGGGACTGCAACTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTGGTCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5037076‑5036927 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgagGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGCCCGGCGCAAGGCAGCTTGCTGGATGACCTGCTCGATAC  >  NC_002947/5036999‑5037144                                                                                                                                                                                                                                                                                                          GTGGCGTTTGAGCAGGGCGATTTCGAACTTGAATTGTTCGATGAGGATTTCGTCGTTCTGGATCTTCCGGCTCATCGCCTCGACCTGGGACTGCAACTACAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTGGTC                                                                                                                                                       <  5:327646/147‑1                                                                              CCTCGACCTGGGACTGCAACTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTGGTCGAGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGC                                                                         >  6:348630/1‑148                                                                              CCTCGACCTGGGACTGCAACTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTGGTCGAGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGC                                                                                 <  3:339057/140‑1                                                                              CCTCGACCTGGGACTGCAACTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTGGTCGAGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGC                                                                                 >  4:339057/1‑140                                                                               CTCGACCTGGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGCGATGAGCAGGAAGATTCAGAACGATGAAATCCTCATCGAACAGTTCAAGTTCGAAATCGCCCTGCTCAAACGGCA                                                                       >  2:286551/1‑149                                                                               CTCGACCTGGGACTGCAACTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTGGTCGAGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCA                                                                       <  5:348630/149‑1                                                                                        GGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGCGATGAGCAGGAAGATTCAGAACGATGAAATCCTCATCGAACAGTTCAAGTTCGAAATCGCCCTGCTCAAACGGCACAAGTTT                                                                <  1:286551/147‑1                                                                                                                                                  TCGAGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGCCCGGCGCAAGGCAGCTT                       <  3:150593/130‑1                                                                                                                                                  TCGAGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGCCCGGCGCAAGGCAGCTT                       >  4:150593/1‑130                                                                                                                                                    GAGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGCCCGGCGCAAGGCAGCTTGCTGGATGACCTGCTCGATAC  <  1:105613/149‑1                                                                                                                                                    GAGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGCCCGGCGCAAGGCAGCTTGCTGGATGACCTGCTCGATA   <  1:11541/148‑1                                                                                                                                                    GAGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGCCCGGCGCAAGGCAGCTTGCTGGATGACCTGCTCGATA   >  1:156745/1‑148                                                                                                                                                     AGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGCCCG                                     >  3:99537/1‑113                                                                                                                                                     AGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGCCCG                                     <  4:99537/113‑1                                                                                                                                                      GGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGCCCGGCGCAAGGCAG                          <  7:107454/123‑1                                                                                                                                                      GGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGCCCGGCGCAAGGCAG                          >  8:107454/1‑123                                                                                                                                                                                                                                                                                                          GTGGCGTTTGAGCAGGGCGATTTCGAACTTGAATTGTTCGATGAGGATTTCGTCGTTCTGGATCTTCCGGCTCATCGCCTCGACCTGGGACTGCAACTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTGGTCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5037076‑5036927 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgagGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGCCCGGCGCAAGGCAGCTTGCTGGATGACCTGCTCGATAC  >  NC_002947/5036999‑5037144

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.