New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5120033	54 (1.000)	4 (0.080)	4/246	NT	6.7%	coding (223/558 nt)	PP_4506	nitroreductase family protein
	?	NC_002947	= 5120053	60 (1.170)					coding (203/558 nt)	PP_4506	nitroreductase family protein

GCGCGTGCGCAGCAATCAGAATACCGTGCGCCGCACAGCCCGCCGCCAGGCGCTGCTCGGACTTGGGCACCTTGAAGTGGTCCTGCAACCTGGCCACCACCACGATCAGCAACGGCGCCCGCAGCGGCATCGCACGGGCCTTGTCCAGTGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5119880‑5120033 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcagcACAAGGGCGATGCCAGCCAGGCTGCACTGGACAAGGCCCGTGCGATGCCGCTGCGGGCGCCGTTGCTGATCGTGGTGGTGGCCAGGTTGCAGGACCACTTCAAGGTGCCCAAGTCCGAGCAGCGCCTGGCGGCGGGCTGTGCGG  <  NC_002947/5120053‑5119910                                                                                                                                                                                                                                                                                                            GCGCGTGCGCAGCAATCAGAATACCGTGCGCCGCACAGCCCGCCGCCAGGCGCTGCTCGGACTTGGGCACCTTGAAGTGGTCCTGCAACCTGGCCACCACCACGATCAGCAACGGCGCCCGCAGCGGCATCGCACGGGCCTTGTCCAGT                                                                                                                                                       >  2:179392/1‑149  CGCGTGCGCAGCAATCAGAATACCGTGCGCCGCACAGCCCGCCGCCAGGCGCTGCTCGGACTTGGGCACCTTGAAGTGGTCCTGCAACCTGGCCACCACCACGATCAGCAACGGCGCCCGCAGCGGCATCGCACGGGCCTTGTCCAGTG                                                                                                                                                      <  5:116293/149‑1   GCGTGCGCAGCAATCAGAATACCGTGCGCCGCACAGCCCGCCGCCAGGCGCTGCTCGGACTTGGGCACCTTGAAGTGGTCCTGCAACCTGGCCACCACCACGATCAGCAACGGCGCCCGCAGCGGCATCGCACGGGCCTTGTCCAGTGC                                                                                                                                                     <  2:314902/149‑1   GCGTGAGCAGCAATCAGATTTCCGTGCGCCGCTCTTCCCGCCGCCAGGCGCTGCTCGGACTTGGGCACCTTGAAGTGGTCCTGCTACCTTGCCACCACCACGATGAGCAACGGCGCCCGCAGCGGCATCGCTCGGGGCTTGTCCAGTGC                                                                                                                                                     <  6:219092/149‑1     GTGCGCAGCAATCAGAATACCGTGCGCCGCACAGCCCGCCGCCAGGCGCTGCTCGGACTTGGGCACCTTGAAGTGGTCCTGCAACCTGGCCACCACCACGATCAGCAACGGCGCCCGCAGCGGCATCGCACGGGCCTTGTCCAGTG                                                                                                                                                      >  3:173882/1‑146     GTGCGCAGCAATCAGAATACCGTGCGCCGCACAGCCCGCCGCCAGGCGCTGCTCGGACTTGGGCACCTTGAAGTGGTCCTGCAACCTGGCCACCACCACGATCAGCAACGGCGCCCGCAGCGGCATCGCACGGGCCTTGTCCAGTG                                                                                                                                                      <  4:173882/146‑1      TGCGCAGCAATCAGAATACCGTGCGCCGCACAGCCCGCCGCCAGGCGCTGCTCGGACTTGGGCACCTTGAAGTGGTCCTGCAACCTGGCCACCACCACGATCAGCAACGGCGCCCGCAGCGGCATCGCACGGGCCTTGTCCAGTGCAGC                                                                                                                                                  <  6:18074/149‑1                  AGAATACCGTGCGACGCACAGCCCGCCGCCAGGCGCTGCTCGGACTTGGGCACCATCAAGTGGTCCTGCAACCTCGCCACCACCACGATCAACAACGGCGCCCGCAGCGGCATCGCACGGGCCTTCTCCAGTGCAGCACAAGGCCCATG                                                                                                                                      >  4:5654/1‑149                                    CAGCCCGCCGCCAGGCGCTGCTCGGACTTGTGCACCTTGAAGTGGTCCTGCAACCTGGCCACCACCACGATCAACAACGGCGCCCGCAGCGGCATCGCACGGGCCTTTTCCAGTGCAGCACAAGGGCGATGCCAGCCAGGCTGCACTGG                                                                                                                    <  3:5654/149‑1                                                                                        ACCTGGCCACCACCACGATCAGCAACGGCGCCCGCAGCGGCATCGCACGGGCCTTGTCCAGTGCAGCACAAGGGCGATGCCAGCCAGGCTGCACT                                                                                                                      <  3:129245/95‑1                                                                                        ACCTGGCCACCACCACGATCAGCAACGGCGCCCGCAGCGGCATCGCACGGGCCTTGTCCAGTGCAGCACAAGGGCGATGCCAGCCAGGCTGCACT                                                                                                                      >  4:129245/1‑95                                                                                                                                                    GTGCAGCACAAGGGCGATGCCAGCCAGGCTGCACTGGACAAGGCCCGTGCGATGCCGCTGCGGGCGCCGTTGCTGATCGTGGTGGTGGCCAGGTTGCAGGACCACTTCAAGGTGCCCAAGTCCGAGCAGCGCCTGGCGGCGGGCTGTGC    >  6:216343/1‑149                                                                                                                                                     TGCAGCACAAGGGCGATGCCAGCCAGGCTGCACTGGACAAGGCCCGTGCGATGCCGCTGCGGGCGCCGTTGCTGATCGTGGTGGTGGCCAGGTTGCAGGACCACTTCAAGGTGCCCAAGTCCGAGCAGCGCCTGGCGGCGGGCTGTGCG   >  7:89783/1‑149                                                                                                                                                      GCAGCACAAGGGCGATGCCAGCCAGGCTGCACTGGACAAGGCCCGTGCGATGCCGCTGCGGGCGCCGTTGCTGATCGTGGTGGTGGCCAGGTTGCAGGACCACTTCAAGGTGCCCAAGTCCGAGCAGCGCCTGGCGGCGGGCTGTGCGG  >  1:179392/1‑149                                                                                                                                                                                                                                                                                                            GCGCGTGCGCAGCAATCAGAATACCGTGCGCCGCACAGCCCGCCGCCAGGCGCTGCTCGGACTTGGGCACCTTGAAGTGGTCCTGCAACCTGGCCACCACCACGATCAGCAACGGCGCCCGCAGCGGCATCGCACGGGCCTTGTCCAGTGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5119880‑5120033 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcagcACAAGGGCGATGCCAGCCAGGCTGCACTGGACAAGGCCCGTGCGATGCCGCTGCGGGCGCCGTTGCTGATCGTGGTGGTGGCCAGGTTGCAGGACCACTTCAAGGTGCCCAAGTCCGAGCAGCGCCTGGCGGCGGGCTGTGCGG  <  NC_002947/5120053‑5119910

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.