| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5148568 = | 75 (1.390) | 4 (0.080) | 4/246 | NT | 5.5% | intergenic (‑29/+67) | PP_5695/PP_4534 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 5148621 = | 67 (1.310) | intergenic (‑82/+14) | PP_5695/PP_4534 | hypothetical protein/hypothetical protein | |||||
AATGCACGAGCTGGAGACCCTCCGCAAGTTGCTCGAATCGGCGCTGGCTCAAGTCCAAAAGCCAGCGGACTCTCAGCCGTTGCATTAACCGCATCATGACTCGCCTGGGGGCCCCTGAAGGTGCCCGGCTTGCCGGCGATTGGGCCAGCCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5148722‑5148568‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccaggcGAGTCATGATGCGGTTAATGCAACGGCTGAGAGTCCGCTGGCTTTTGGACTTGAGCCAGCGCCGATTCGAGCAACTTGCGGAGGGTCTCCAGCTCGTGCATTGAGGCCATCATCAACACCGAGACGGGTGATCTCGGCTGCAT > NC_002947/5148621‑5148763 AATGCACGAGCTGGAGACCCTCCGCAAGTTGCTCGAATCGGCGCTGGCTCAAGTCCAAAAGCCAGCGGACTCTCAGCCGTTGCATTAACCGCATCATGACTCGCCTGGGGGCCCCTGAAGGTGCCCGGCTTGCCGGCGATTGGGCCAGC > 2:249203/1‑149 CACGAGCTGGAGACCCTCCGCAAGTTGCTCGAATCGGCGCTGGCTCAAGTCCAAAAGCCAGCGGACTCTCAGCCGTTGCATTAACCGCATCATGACTCGCCTGGGGGCCCCTGAAGGTGCCCGGCTTGCCGGCGATTGGGCCAGCCCAG > 1:19237/1‑149 GAGCTGGAGACCCTCCGCAAGTTGCTCGAATCGGCGCTGGCTCAAGTCCAAAAGCCAGCGGACTCTCAGCCGTTGCATTAACCGCATCATGACTCGCCTGGGGGCCCCTGAAGGTGCCCGGCTTGCCGGCGATTGGGCCAGCCCAGGC > 8:137731/1‑148 AAAAGCCAGCGGACTCTCAGCCGTTGCATTAACCGCATCATGACTCGCCTGGGGGCCCCTGAAGGTGGCCGGCTTGCCGGCGATTGGGCCAGCC < 7:122612/94‑1 AAAAGCCAGCGGACTCTCAGCCGTTGCATTAACCGCATCATGACTCGCCTGGGGGCCCCTGAAGGTGGCCGGCTTGCCGGCGATTGGGCCAGCC > 8:122612/1‑94 ACTCGCCTGGGGGCCCCTGAAGGTGCCCGGCTTGCCGGCGATTGGGCCAGCCCAGGCGAGTCATGATGCGGTTAATGCAACGGCTGAGAGTCCGCTGGCTTTTGGACTTGAGCCAGCGCCGATTCGAGCAACTTGCGGAGGGTCTCCAG > 5:337392/1‑149 TCGCCTGGGGGCCCCTGAAGGTGCCCGGCTTGCCGGCGATTGGGCCAGCCCAGGCGAGTCATGATGCGGTTAATGCAACGGCTGAGAGTCCGCTGGCTTTTGGACTTGAGCCAGCGCCGATTCGAGCAACTTGCGGAGGGTCTCCAGCT > 5:214737/1‑149 GCCTGGGGGCCCCTGAAGGTGCCCGGCTTGCCGGCGATTGGGCCAGCCCAGGCGAGTCATGATGCGGTTAATGCAACGGCTGAGAGTCCGCTGGCTTTTG > 3:12551/1‑100 GCCTGGGGGCCCCTGAAGGTGCCCGGCTTGCCGGCGATTGGGCCAGCCCAGGCGAGTCATGATGCGGTTAATGCAACGGCTGAGAGTCCGCTGGCTTTTG < 4:12551/100‑1 CCCAGGCGAGTCATGATGCGGTTAATGCAACGGCTGAGAGTCCGCTGGCTTTTGGACTTGAGCCAGCGCCGATTCGAGCAACTTGCGGAGGGTCTCCAGCTCGTGCATTGAGGCCATCATCAACACCGAGACGGGTGATCTCGGCTGCA > 3:98912/1‑149 CCCAGGCGAGTCATGATGCGGTTAATGCAACGGCTGAGAGTCCGCTGGCTTTTGGACTTGAGCCAGCGCCGATTCGAGCAACTTGCGGAGGGTCTCCAGCTCGTGCATTGAGGCCATCATCAACACCGAGACGGGTGATCTCGGCTGCA > 6:88789/1‑149 CCAGGCGAGTCATGATGCGGTTAATGCAACGGCTGAGAGTCCGCTGGCTTTTGGACTTGAGCCAGCGCCGATTCGAGCAACTTGCGGAGGGTCTCCAGCTCGTGCATTGAGGCCATCATCAACACCGAGACGGGTGATCTCGGCTGCAT > 8:239963/1‑149 AATGCACGAGCTGGAGACCCTCCGCAAGTTGCTCGAATCGGCGCTGGCTCAAGTCCAAAAGCCAGCGGACTCTCAGCCGTTGCATTAACCGCATCATGACTCGCCTGGGGGCCCCTGAAGGTGCCCGGCTTGCCGGCGATTGGGCCAGCCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5148722‑5148568‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccaggcGAGTCATGATGCGGTTAATGCAACGGCTGAGAGTCCGCTGGCTTTTGGACTTGAGCCAGCGCCGATTCGAGCAACTTGCGGAGGGTCTCCAGCTCGTGCATTGAGGCCATCATCAACACCGAGACGGGTGATCTCGGCTGCAT > NC_002947/5148621‑5148763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |