New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 517249753 (0.980)4 (0.080) 4/248 NT 6.9% coding (463/1698 nt) fadD‑I long‑chain‑fatty acid‑‑CoA ligase
?NC_002947 = 5172524 57 (1.110)coding (436/1698 nt) fadD‑I long‑chain‑fatty acid‑‑CoA ligase

CGGGTTGGCTTCGGTCACGGGCTGGCCCTTGCCCAGCGCCAGGGCGTCATTGAAACGCACGGCCTGCGGCAGGTTGTAGGCCGGCACCATCTTCTTCACGTACTTGATCACGCTGTTGATCAGCAGGCGCTTGAGTGGTGGCAGCAGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5172348‑5172497
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtcAGGCACGTTATCGTCACTGAAGTTGCCGACCTGCTGCCACCACTCAAGCGCCTGCTGATCAACAGCGTGATCAAGTACGTGAAGAAGATGGTGCCGGCCTACAACCTGCCGCAGGCCGTGCGTTTCAATGACGCCCTGGCGCTGGGC  <  NC_002947/5172524‑5172378
                                                                                                                                                                                                                                                                                                         
CGGGTTGGCTTCGGTCACGGGCTGGCCCTTGCCCAGCGCCAGGGCGTCATTGAAACGCACGGCCTGCGGCAGGTTGTAGGCCGGCACCATCTTCTTCACGTACTTGATCACGCTGTTGATCAGCAGGCGCTTGAGTGGTGGCAGCAGG                                                                                                                                                       <  1:245411/148‑1
        CTTCGGTCACGGGCTGGCCCTTGCCCAGCGCCAGGGCGTCATTGAAACGCACGGCCTGCGGCAGGTTGTAGGCCGGCACCATCTTCTTCACGTACTTGATCACGCTGTTGATCAGCAGGCGCTTGAGTGGTGGCAGCAGGTCAGGCACG                                                                                                                                              >  4:89155/1‑149
                  GGGCTGGCCCTTGCCCAGCGCCAGGGCGTCATTGAAACGCACGGCCTGCGGCAGGTTGTAGGCCGGCACCATCTTCTTCACGTACTTGATCACGCTGTTGATCAGCAGGCGCTTGAGTGGTGGCAGCAGGT                                                                                                                                                      >  5:817/1‑131
                  GGGCTGGCCCTTGCCCAGCGCCAGGGCGTCATTGAAACGCACGGCCTGCGGCAGGTTGTAGGCCGGCACCATCTTCTTCACGTACTTGATCACGCTGTTGATCAGCAGGCGCTTGAGTGGTGGCAGCAGGT                                                                                                                                                      <  6:817/131‑1
                                    CGCCAGGGCGTCATTGAAACGCACGGCCTGCGGCAGGTTGTAGGCCGGCACCATCTTCTTCACGTACTTGATCACGCTGTTGATCAGCAGGCGCTTGAGTGGTGGCAGCAGGTCAGGCACGTTATCGTCACTGAAGTTGCCGACCTGCT                                                                                                                  <  3:89155/149‑1
                                                    AAACGCACGGCCTGCGGCAGGTTGTAGGCCGGCACCATCTTCTTCACGTACTTGATCACGCTGTTGATCAGCAGGCGCTTGAGTGGTGGCAGCAGGTCAGGCACGTTATCGTCACTGAAGTTGCCGAC                                                                                                                       <  3:259047/128‑1
                                                    AAACGCACGGCCTGCGGCAGGTTGTAGGCCGGCACCATCTTCTTCACGTACTTGATCACGCTGTTGATCAGCAGGCGCTTGAGTGGTGGCAGCAGGTCAGGCACGTTATCGTCACTGAAGTTGCCGAC                                                                                                                       >  4:259047/1‑128
                                                                                                                                                  GGTCAGGCACGTTATCGTCACTGAAGTTGCCGACCTGCTGCCACCACTCAAGCGCCTGCTGATCAACAGCGTGATCAAGTACGTGAAGAAGATGGTGCCGGCCTACAACCTGCCGCAGGCCGTGCGTTTCAATGACGCCCTGGCGCTGG    <  2:11078/149‑1
                                                                                                                                                    TCAGGCACGTTATCGTCACTGAAGTTGCCGACCTGCTGCCACCACTCAAGCGCCTGCTGATCAACAGCGTGATCAAGTACGTGAAGAAGATGGTGCCGGCCTACAACCTGCCGCAGGCCGTGCGTTTCAATGACGCCCAGGCGCTGGGC  <  4:30766/149‑1
                                                                                                                                                                                                                                                                                                         
CGGGTTGGCTTCGGTCACGGGCTGGCCCTTGCCCAGCGCCAGGGCGTCATTGAAACGCACGGCCTGCGGCAGGTTGTAGGCCGGCACCATCTTCTTCACGTACTTGATCACGCTGTTGATCAGCAGGCGCTTGAGTGGTGGCAGCAGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5172348‑5172497
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtcAGGCACGTTATCGTCACTGAAGTTGCCGACCTGCTGCCACCACTCAAGCGCCTGCTGATCAACAGCGTGATCAAGTACGTGAAGAAGATGGTGCCGGCCTACAACCTGCCGCAGGCCGTGCGTTTCAATGACGCCCTGGCGCTGGGC  <  NC_002947/5172524‑5172378

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.