New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5228936 =	58 (1.070)	3 (0.060)	3/250	NT	5.4%	coding (123/2391 nt)	PP_4606	ferric siderophore receptor
	?	NC_002947	5228976 =	49 (0.940)					coding (83/2391 nt)	PP_4606	ferric siderophore receptor

TAATCACCCCCTCACAGGTCTGCGTCCATGAAGTTCACCCCGCGTTGCGTCCCTCTCTGGTTCGGCCTTGCTGCGCTCCCGGCCTTCGCTGTCGCCCCCCTGGCAACCGCGGCCGAGCAGCTGCAGGCCTATGCCTTCGCCCAGCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5229085‑5228936 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccGCGGTTGCCAGGGGGGCGACAGCGAAGGCCGGGAGCGCAGCAAGGCCGAACCAGAGAGGGACGCAACGCGGGGTGAACTTCATGGACGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGAT  >  NC_002947/5228976‑5229121                                                                                                                                                                                                                                                                                                          TAATCACCCCCTCACAGGTCTGCGTCCATGAAGTTCACCCCGCGTTGCGTCCCTCTCTGGTTCGGCCTTGCTGCGCTCCCGGCCTTCGCTGTCGCCCCCCTGGCAACCGCGGCCGAGCAGCTGCAGGCCTATGCCTTCGCCCAGCCGGC                                                                                                                                                     >  2:119158/1‑149                                                                                                         AACCGCGGCCGAGCAGCTGCAGGCCTATGCCTTCGCCCAGCCGGCCGCGGTTGCCAGGGGGGCGACAGCGAAGGCCGG                                                                                                                    >  1:127877/1‑78                                                                                                         AACCGCGGCCGAGCAGCTGCAGGCCTATGCCTTCGCCCAGCCGGCCGCGGTTGCCAGGGGGGCGACAGCGAAGGCCGG                                                                                                                    <  2:127877/78‑1                                                                                                           CCGCGGCCGAGCAGCTGCAGGCCTATGCCTTCGCCCAGCCGGCCGCGGTTGCCAGGGGGGCGACAGCGAAGGCCGGGAGCGCAGCAAGGCCGAACCAGAGAGGGACGCAACGCGGGGTGAACTTCATGGACGCAGACCTGTGAGGGGGT                                           >  5:279005/1‑149                                                                                                                                                    GCCGCGGTTGCCAGGGGGGCGACAGCGAAGGCCGGGAGCGCAGCAAGGCCGAACCAGAGAGGGACGCAACGCGGGGTGAACTTCATGGACGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGAT  <  1:219486/149‑1                                                                                                                                                                                                                                                                                                          TAATCACCCCCTCACAGGTCTGCGTCCATGAAGTTCACCCCGCGTTGCGTCCCTCTCTGGTTCGGCCTTGCTGCGCTCCCGGCCTTCGCTGTCGCCCCCCTGGCAACCGCGGCCGAGCAGCTGCAGGCCTATGCCTTCGCCCAGCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5229085‑5228936 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccGCGGTTGCCAGGGGGGCGACAGCGAAGGCCGGGAGCGCAGCAAGGCCGAACCAGAGAGGGACGCAACGCGGGGTGAACTTCATGGACGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGAT  >  NC_002947/5228976‑5229121

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.