New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5231166	64 (1.180)	4 (0.080)	4/254	NT	6.1%	coding (1530/1578 nt)	PP_4610	PepSY‑associated TM helix domain‑containing protein
	?	NC_002947	= 5231188	61 (1.150)					coding (1508/1578 nt)	PP_4610	PepSY‑associated TM helix domain‑containing protein

GCGCGGGCGCGGCTTGCGCCCAAGCAAGTCGCTGAAATGCTTTTCCATCGCCAGGCAAAGGGCAACTAAGCCTGCAAAGGCGATCAGTGCGTTACCCAGCATCAGCTCGCCCCCAACGTTTCAATGCTCGGTTTTTTTGCCGCACGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5231017‑5231166 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccCCACGCCCGTAGCCAAGCGCGCGGCACGTGCGGCAAAAAAACCGAGCATTGAAACGTTGGGGGCGAGCTGATGCTGGGTAACGCACTGATCGCCTTTGCAGGCTTAGTTGCCCTTTGCCTGGCGATGGAA  <  NC_002947/5231188‑5231059                                                                                                                                                                                                                                                                                          GCGCGGGCGCGGCTTGCGCCCAAGCAAGTCGCTGAAATGCTTTTCCATCGCCAGGCAAAGGGCAACTAAGCCTGCAAAGGCGATCAGTGCGTTACCCAGCATCAGCTCGCCCCCAACGTTTCAATGCTCGGTTTTTTTGCCGCACGTGC                                                                                                                                     <  1:8204/149‑1  CGCGGGCGCGGCTTGCGCCCAAGCAAGTCGCTGAAATGCTTTTCCATCGCCAGGCAAAGGGCAACTAAGCCTGCAAAGGCGATCAGTGCGTTACCCAGCATCAGCTCGCCCCCAACGTTTCAATGCTCGGTTTTTTTGCCGCACGTGCC                                                                                                                                    <  1:320710/149‑1                                                                                GCGATCAGTGCGTTACCCAGCATCAGCTCGCCCCCAACGTTTCAATGCTCGGTTTTTTTGCCGCACGTGCCCCACGCCCGTAGCCAAGCGCGCGGCACGTGCGG                                                                                                   <  7:229970/104‑1                                                                                GCGATCAGTGCGTTACCCAGCATCAGCTCGCCCCCAACGTTTCAATGCTCGGTTTTTTTGCCGCACGTGCCCCACGCCCGTAGCCAAGCGCGCGGCACGTGCGG                                                                                                   >  8:229970/1‑104                                                                                                           TCGCCCCCAACGTTTCAATGCTCGGTTTTTTTGCCGCACGTGCCCCACGCCCGTAGCCAAGCGCGCGGCACGTGCG                                                                                                    <  1:298468/76‑1                                                                                                           TCGCCCCCAACGTTTCAATGCTCGGTTTTTTTGCCGCACGTGCCCCACGCCCGTAGCCAAGCGCGCGGCACGTGCG                                                                                                    >  2:298468/1‑76                                                                                                                                                     CCCCACGCCCGTAGCCAAGCGCGCGGCACGTGCGGCAAAAAAACCGAGCATTGAAACGTTGGGGGCGAGCTGATGCTGGGTAACGCACTGATCGCCTTTGCAGGCTTAGTTGCCCTTTGCCTGGCGATGGAA  <  1:126747/132‑1                                                                                                                                                     CCCCACGCCCGTAGCCAAGCGCGCGGCACGTGCGGCAAAAAAACCGAGCATTGAAACGTTGGGGGCGAGCTGATGCTGGGTAACGCACTGATCGCCTTTGCAGGCTTAGTTGCCCTTTGCCTGGCGATGGAA  >  2:126747/1‑132                                                                                                                                                                                                                                                                                          GCGCGGGCGCGGCTTGCGCCCAAGCAAGTCGCTGAAATGCTTTTCCATCGCCAGGCAAAGGGCAACTAAGCCTGCAAAGGCGATCAGTGCGTTACCCAGCATCAGCTCGCCCCCAACGTTTCAATGCTCGGTTTTTTTGCCGCACGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5231017‑5231166 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccCCACGCCCGTAGCCAAGCGCGCGGCACGTGCGGCAAAAAAACCGAGCATTGAAACGTTGGGGGCGAGCTGATGCTGGGTAACGCACTGATCGCCTTTGCAGGCTTAGTTGCCCTTTGCCTGGCGATGGAA  <  NC_002947/5231188‑5231059

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.