New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5231189 =	61 (1.130)	6 (0.120)	6/250	NT	10.0%	coding (1507/1578 nt)	PP_4610	PepSY‑associated TM helix domain‑containing protein
	?	NC_002947	5231216 =	49 (0.940)					coding (1480/1578 nt)	PP_4610	PepSY‑associated TM helix domain‑containing protein

GCTGCTGCCGTTGCTCAATGGCCTGACGACTGACCGGGGCTTGAACCATTCGGTACTGGAGGGCGACTGGGCCATGGCCGGCTTCGATCTGACAGCCCTGGGGACCGGCCTGTTTCTGGCCTGGCTGGCTCGCAAGATGCTGGTCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5231337‑5231189 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCA  >  NC_002947/5231216‑5231362                                                                                                                                                                                                                                                                                                          GCTGCTGCCGTTGCTCAATGGCCTGACGACTGACCGGGGCTTGAACCATTCGGTACTGGAGGGCGACTGGGCCATGGCCGGCTTCGATCTGACAGCCCTGGGGACCGGCCTGTTTCTGGCCTGGCTGGCTCGCAAGATGCTGGTCAGC                                                                                                                                                      <  1:295237/148‑1                                                                                                                       GCCTGGCTGGCTCGCAAGATGCTGGTCAGCCAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAG                                                                  >  7:212365/1‑114                                                                                                                       GCCTGGCTGGCTCGCAAGATGCTGGTCAGCCAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAG                                                                  <  8:212365/114‑1                                                                                                                          TGGCTGGCTCGCAAGATGCTGGTCAGCCAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGG                                                                        <  1:8636/105‑1                                                                                                                          TGGCTGGCTCGCAAGATGCTGGTCAGCCAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGG                                                                        >  2:8636/1‑105                                                                                                                            GCTGGCTCGCAAGATGCTGGTCAGCCAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACC                                                                              <  3:186252/97‑1                                                                                                                            GCTGGCTCGCAAGATGCTGGTCAGCCAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACC                                                                              >  4:186252/1‑97                                                                                                                                                  AGCCAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGC    >  1:340480/1‑149                                                                                                                                                  AGCCAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGC    >  2:156794/1‑149                                                                                                                                                  AGCCAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGC    <  5:319383/149‑1                                                                                                                                                    CCAGGCCAGAAACAGGCCGGTTCACAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCAAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGC    >  8:300792/1‑147                                                                                                                                                    CCAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCA  <  1:156794/149‑1                                                                                                                                                    CCAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCA  <  2:33806/149‑1                                                                                                                                                     CAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAG                     <  3:337934/129‑1                                                                                                                                                     CAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAG                     >  4:337934/1‑129                                                                                                                                                                                                                                                                                                          GCTGCTGCCGTTGCTCAATGGCCTGACGACTGACCGGGGCTTGAACCATTCGGTACTGGAGGGCGACTGGGCCATGGCCGGCTTCGATCTGACAGCCCTGGGGACCGGCCTGTTTCTGGCCTGGCTGGCTCGCAAGATGCTGGTCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5231337‑5231189 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCA  >  NC_002947/5231216‑5231362

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.