New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5259986 =	67 (1.240)	4 (0.080)	4/248	NT	5.9%	coding (528/1179 nt)	yqeF	acetyl‑CoA acetyltransferase
	?	NC_002947	5260017 =	64 (1.240)					coding (559/1179 nt)	yqeF	acetyl‑CoA acetyltransferase

CCACTGCCTTGCGCTGCGATTCGGCAGCAAAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5260020‑5259986 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaggcaGTGGCAGCGATCGAGGCCGGCCGTTTCGACGCTGAAATCACCCCCATCGTGCTGCCGCAGAAAAAGGGCGAGCCCAAGGTTTTTGCCCGTGACGAGCAACCACGCCCGGACACCACCGCCGAGTCCCTGGCCAAACTGCGCCCGGC  >  NC_002947/5260017‑5260162                                                                                                                                                                                       CCACTGCCTTGCGCTGCGATTCGGCAGCAAAGGCAGTGGCAGCGATCGAGGCCGGCCGTTTCGACGCTGAAATCACCCCCATCGTGCTGCCGCAGAAAAAGGGCGA                                                                             >  3:49092/1‑106 CCACTGCCTTGCGCTGCGATTCGGCAGCAAAGGCAGTGGCAGCGATCGAGGCCGGCCGTTTCGACGCTGAAATCACCCCCATCGTGCTGCCGCAGAAAAAGGGCGA                                                                             <  4:49092/106‑1       CCTTGCGCTGCGATTCGGCAGCAAAGGCAGTGGCAGCGATCGAGGCCGGCCGTTTCGACGCTGAAATCACCCCCATCGTGCTGCCGCAGAAAAAG                                                                                  <  3:159179/95‑1       CCTTGCGCTGCGATTCGGCAGCAAAGGCAGTGGCAGCGATCGAGGCCGGCCGTTTCGACGCTGAAATCACCCCCATCGTGCTGCCGCAGAAAAAG                                                                                  >  4:159179/1‑95                               AGGCAGTGGCAGCGATCGAGGCCGGCCGTTTCGACGCTGAAATCACCCCCATCGTGCTGCCGCAGAAAAAGGGCGAGCCCAAGGTTTTTGCCCGTGACGAGCAACCACGCCCGGATACCACCGCCGAGTCCCTGGCCAAACTGCGCCCG    <  8:217185/149‑1                                 GCAGTGGCAGCGATCGCGGCCGGCCGTTTCGACGCTGAAATCACCCCCATCGTGCTGCCGCAGAAAAAGGGCGAGCCCAAGGTTTTTGCCCGTGACGAGCAACCACGCCCGGACACCACCGCCGAGTCCCTGGCCAAACTGCGCCCGGC  >  8:222546/1‑149                                                                                                                                                                                       CCACTGCCTTGCGCTGCGATTCGGCAGCAAAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5260020‑5259986 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaggcaGTGGCAGCGATCGAGGCCGGCCGTTTCGACGCTGAAATCACCCCCATCGTGCTGCCGCAGAAAAAGGGCGAGCCCAAGGTTTTTGCCCGTGACGAGCAACCACGCCCGGACACCACCGCCGAGTCCCTGGCCAAACTGCGCCCGGC  >  NC_002947/5260017‑5260162

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.